Gene Psyr_4175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4175 
Symbol 
ID3369712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4966716 
End bp4967069 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID637654533 
Producttransport-associated protein 
Protein accessionYP_237243 
Protein GI66047402 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TCGCTATTGC CGCTGCTACC GCTACTGCCC TGACTCTGAC CATGGCCAAC 
GCTGCTTTCG CACAGACCTC GGCCCAAGCG CCTATGGTTC TGGCAGCTAA CACCACCACT
CAAGAAGTCA AAGAAGATAC TTCTGATGCC TGGATCACCA CCAAAGTCAA AGCTGACATC
CTGACTGAGA AAGGCCTGAC TGACGCAGGT ATCAAGGTTG AGACCAACAA AGGTGTGGTT
TCCCTGTCTT CCATGAAACC AGTGACTGAA GCTCAGAAAA ACACCGCCGT CGCTATCACC
AAGAAAATCA AAGGTGTTAA AGACGTATCG GCTGCTGGCC TGAAAGCCGA GTAA
 
Protein sequence
MKKFAIAAAT ATALTLTMAN AAFAQTSAQA PMVLAANTTT QEVKEDTSDA WITTKVKADI 
LTEKGLTDAG IKVETNKGVV SLSSMKPVTE AQKNTAVAIT KKIKGVKDVS AAGLKAE