| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4168 |
|---|
| Symbol | |
|---|
| ID | 3369705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4957874 |
|---|
| End bp | 4958905 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637654526 |
|---|
| Product | K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| Protein accession | YP_237236 |
|---|
| Protein GI | 66047395 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTG GCTTGTTATT GCTGCTGATC GGGGCAGAAC TGTCAGTGCG TGCAGCGGTG
CATCTGGCGG CGATTTTCAA GGTCCGGCCA CTGATCGTCG GCCTGACCGT CGTGGCAATG
GGCACCAGCG CGCCGCAGAT GGCAGTAAGC CTGCAAGCCG CGTTTGCCGA TAACACCGAC
ATCGCGGTGG GCAGTGTCAT CGGCGGTAAC ATTTTCAATG TACTGGTGAT CCTGGGCCTG
TGCGCGCTGA TCATTCCGTT ACGCGTTGCC CGTCAGGTGT TGCACGTCGA CATTCCGCTG
ATGATCGGTG CCTGCCTGCT GGCTATCGGC CTGTCGTGGA GCGGCGAATT CAGCAAGCTT
GACGGCGCAC TGCTGCTCGC CGGGTTGCTG TTCTGCCTGA TCGTCATCAT CCGTCAGGGC
GGTCATGCGC CGCGTCACGG ACATGCCGAG ACAACCGCAA AACCTCGTAC CTTCACGCGT
ATCCTCATGC TTGCCACTGG CCTGCTGCTG TTGACCGCTG GCGGACACCT GCTGGTCGAC
GCGTCAGTGG TGATTGCAAT CCATCTTGGG CTGTCCGAAC GCATCGTCGG CCTTACCATC
ATTGCCATCG GCACCTCATT GCCGGCACTG ATGACCTCGC TGATCGCAGC GTTTCGCGGC
GAACGCGATA TTGCCGTGGG CAACGTGATC GGCAGCAACC TGTTCAATCT GCTGGGCGTG
CTGGGGCTGA CCGCACTGGT CGCCCCGGTG CCGCTGACGA TCTCGCCAAA TGCGCTGGTA
TTCGACCTGC CGATCATGCT CGGCGTGTCG CTGCTGTGCG TGCCGCTGTT CTATTCCGGA
TACCGGATAG ACCGTCTGGA AGGCCTGTTT CTGCTGTCGT TGTACCTGAC CTACGGGCTG
CATATCCTGT CGATCAGCAC CGGTATGGCG CTGGCCGAAC GGCTTGAAAG CAAAATGCTC
ACGCTGGTGT TACCTGTGCT GGGCGCTGTG GTTGTCTGGG GCACGATCCG CGCCTGGCGA
CGCCAGCACT GA
|
|---|
| Protein sequence | MLSGLLLLLI GAELSVRAAV HLAAIFKVRP LIVGLTVVAM GTSAPQMAVS LQAAFADNTD
IAVGSVIGGN IFNVLVILGL CALIIPLRVA RQVLHVDIPL MIGACLLAIG LSWSGEFSKL
DGALLLAGLL FCLIVIIRQG GHAPRHGHAE TTAKPRTFTR ILMLATGLLL LTAGGHLLVD
ASVVIAIHLG LSERIVGLTI IAIGTSLPAL MTSLIAAFRG ERDIAVGNVI GSNLFNLLGV
LGLTALVAPV PLTISPNALV FDLPIMLGVS LLCVPLFYSG YRIDRLEGLF LLSLYLTYGL
HILSISTGMA LAERLESKML TLVLPVLGAV VVWGTIRAWR RQH
|
|---|
| |