Gene Psyr_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4165 
SymbolgatA 
ID3369702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4954141 
End bp4955592 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content63% 
IMG OID637654523 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_237233 
Protein GI66047392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAA TGACTCTGGC CGAGATCGCT CGCGGACTCG CCGATAAAAA GTTTTCTTCC 
GAAGAGCTGA CTCGCGTTCT GCTGTCGCGC ATCGCGACGC TGGACCCGCA GCTCAACAGC
TTCATCAGCC TCACCGAAGA CCTGGCCATC ACCCAGGCGC AGGCGGCAGA CGCGCGCCGT
GCAGCCGGTG AAAACGGCCC GCTGCTCGGT GCCCCGCTGG CCCACAAGGA CCTGTTCTGC
ACCCAGGGCA TCCGCACCAG CTGCGGCTCG CTGATGCTCG ACAATTTCAA GGCACCCTAC
GACGCCACGG TCGTGTCGCG TCTGGCATCG GCCGGCACAG TGACGCTGGG CAAGACCAAC
ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAATCCAGCC ATTACGGCGC GGTGAAAAAC
CCGTGGAACC TGGAATGCGT CCCTGGTGGC TCTTCGGGTG GTTCGGCAGC CGCGGTCGCT
GCACGCCTGT TGCCTGCCGC AACCGGCACC GACACCGGCG GCTCGATTCG CCAGCCTGCA
GCACTGACCA ACCTCACGGG CCTCAAGCCG ACCTACGGCC GCGTATCGCG CTGGGGCATG
ATTGCCTACG CGTCCAGCCT CGATCAGGCG GGGCCGATGG CACGCACGGC CGAAGACTGT
GCGCTGCTGC TGCAAGGCAT GGCCGGTTTC GACCCGCAGG ACTCCACCAG CATCGACGAA
CCGGTTCCGG ACTACTCCGC CAGCCTCAAT ACCTCGCTCA AGGGCCTGCG TATCGGTGTG
CCGAAAGAGT ATTTCAGCGC AGGCCTCGAC CCGCGCATCG CGCAACTGGT GCATGAAAGC
GTCAGGGAGC TGGAAAAACT CGGCGCGATC GTCAAGGAAG TCAGCCTGCC GAACCTGCAA
CACGCGATCC CGGCCTACTA CGTCATCGCC CCGGCTGAAG CCTCGTCCAA CCTGTCGCGT
TTCGACGGTG TGCGTTTCGG CTACCGCTGC GAAGACCCGA AAGACCTGAC CGACCTGTAC
AAGCGCTCGC GCGCCGAAGG CTTCGGCCCG GAAGTCCAGC GACGCATCAT GGTAGGCGCC
TACGCGCTGT CAGCGGGTTA CTACGACGCC TACTACCTGC AGGCGCAGAA AATCCGTCGC
CTGATCAAGA ACGATTTCAT GAACGCGTTC GCCGATGTCG ACGTGATTCT CGGTCCGACC
ACGCCCAACC CGGCCTGGAA AATCGGCGCC AAGACCCACG ACCCGATTGC CGAATACCTG
GAAGACTTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CCGGCTTGTC CATGCCTGCG
GGCTTCGTCG ACGGCCTGCC GGTCGGCGTG CAGCTGCTCG CTCCGTATTT CCAGGAAGGC
CGCCTCTTGA ATGTGGCGCA TCAGTATCAG CAAGTCACCG ACTGGCACAC TCGCGCACCT
GAAGGCTTCT GA
 
Protein sequence
MHQMTLAEIA RGLADKKFSS EELTRVLLSR IATLDPQLNS FISLTEDLAI TQAQAADARR 
AAGENGPLLG APLAHKDLFC TQGIRTSCGS LMLDNFKAPY DATVVSRLAS AGTVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLECVPGG SSGGSAAAVA ARLLPAATGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQA GPMARTAEDC ALLLQGMAGF DPQDSTSIDE
PVPDYSASLN TSLKGLRIGV PKEYFSAGLD PRIAQLVHES VRELEKLGAI VKEVSLPNLQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EDPKDLTDLY KRSRAEGFGP EVQRRIMVGA
YALSAGYYDA YYLQAQKIRR LIKNDFMNAF ADVDVILGPT TPNPAWKIGA KTHDPIAEYL
EDFYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHQYQ QVTDWHTRAP
EGF