Gene Psyr_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4162 
Symbol 
ID3369699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4951291 
End bp4952364 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content64% 
IMG OID637654520 
Productrod shape-determining protein MreC 
Protein accessionYP_237230 
Protein GI66047389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCCG TTCTGTCGGT TGCGTTGATG GTTGTCGACG CCCGCTTTAC GATCCTCAAG 
CCCGTGCGCA GCCAGATGTC GATGGTGCTC ATGCAGTCCT ACTGGATCGT CGACCTGCCG
CAGCGTCTGT ATCAAGGCGT CGCCAGTCAG TTCGGCAGCC GCACAGAGCT GATCGCCGAA
AACGAAAAAC TCAAGACCGA AGCCCTGCTC CTGCAAGGTC GCCTGCAAAA GCTGGCGGCA
CTGACCGAGC AGAACGTTCG GCTGCGTGAG TTGCTGAACT CCTCGGCGCT GGTCAACGAA
AAGGTCGAGG TCGCCGAGCT GATCGGCATG GACCCGAACC CCTTCACCCA TCGCATCATC
ATCAACAAGG GCGAACGCGA CGGCGTGGTG CTCGGCCAGC CTGTGCTAGA TGCGCGCGGC
CTGATGGGGC AGGTGGTCGA GTTGATGCCC TATACCTCAC GTGTCTTGTT GCTGACTGAC
ACCACCCACA GCATCCCGGT GCAGGTCAAC CGCAACGGTT TGCGTGCCAT CGCCAGCGGC
ACCGGTAACC CGGAACGTCT GGAGCTTCGG CATGTGGCGG ACACCGCAGA CATCAAGGAA
GGCGACCTGC TGGTCAGTTC GGGCCTTGGG CAGCGTTTCC CGGCCGGTTA CCCGGTGGCG
ACGGTCAAGG AAGTGATTCA CGACTCCGGC CAGCCGTTTG CGATCGTTCG TGCAGTGCCG
ACCGCTGCGC TGAATCGCAG TCGCTATCTG TTGCTGGTGT TCTCCGACGG GCGCTCGCCG
GAAGAGCGCG CTGCCGATGC CGCGCAAGCA CAGGAATCCC TCGACAAGGG CGTCGAGCCC
TCCGTGATGG CGACACTGCC GCCGCCGACA CCCGCCTTCC CGATGTGGCC GCAGGCCGTC
GTTCCGGTCT TTCCGGGCAG TACGATGACG CACAAGCCTG CAGCGCAATC GGCAACACCT
GCACCTGCAC CGGCGGCCAC GCCCGCGACA CCGGCAAGGC CTGCTGCCCG GCCTGCGGCG
TCACAGCCGC CTGCTTCACG ACCTTCCACT GCCCGGGAGC CTATCGATGG TTAG
 
Protein sequence
MLAVLSVALM VVDARFTILK PVRSQMSMVL MQSYWIVDLP QRLYQGVASQ FGSRTELIAE 
NEKLKTEALL LQGRLQKLAA LTEQNVRLRE LLNSSALVNE KVEVAELIGM DPNPFTHRII
INKGERDGVV LGQPVLDARG LMGQVVELMP YTSRVLLLTD TTHSIPVQVN RNGLRAIASG
TGNPERLELR HVADTADIKE GDLLVSSGLG QRFPAGYPVA TVKEVIHDSG QPFAIVRAVP
TAALNRSRYL LLVFSDGRSP EERAADAAQA QESLDKGVEP SVMATLPPPT PAFPMWPQAV
VPVFPGSTMT HKPAAQSATP APAPAATPAT PARPAARPAA SQPPASRPST AREPIDG