Gene Psyr_4138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4138 
Symbol 
ID3369675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4928000 
End bp4928650 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content57% 
IMG OID637654496 
Producttoluene tolerance 
Protein accessionYP_237206 
Protein GI66047365 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTA TTCTGCGCCG TGGTCTGCTG GTATTGCTGG CCACTCTGCC AATGCTGGCG 
AATGCCGCGG CGACCCCGTC GGCTCATGAC CTGGTGGAGC GCACCACCAA GGAACTGTTG
AGTGACCTGG CGACCAATCG CGAGCAGTAC AAATCCAACC CAAGCGCGTT CTACGATGCC
CTGAACCGCA TCGTCGGTCC TGTCGTGGAT GCCGACGGCA TCTCCAAAAG CATCATGACC
GTGAAGTATT CCCGCAAGGC CAGCCCTGAA CAGGTGAAGC GTTTCGAGGA AAACTTCAAG
CGCAGCCTGA TGCAGTTCTA TGGCAATGCG TTGCTTGAAT TCAACAACCA GGGCATCACC
GTCGCACCTG CCAAGGATGA AGGCGATGAC CGCACCAGCG TGGACATGCA GGTCAAGGGC
AATAACGGCG CGGTCTATCC GGTCTCCTAC ACGCTGGTCA AGCTGAACGG CGAGTGGAAA
GTGCGTAACG TCGTCATCAA CGGCATCAAT ATCGGCAAGC TGTTCCGTGA CCAGTTCGCC
GATGCCATGC AGCGCAACGG CAACAACCTG GACACCACCA TCAACAACTG GGCTGGCGAA
GTGGCCAAGA CCAAATCTAC CGTTGATGCC ACGCAGAAGC CGGTGCAATG A
 
Protein sequence
MISILRRGLL VLLATLPMLA NAAATPSAHD LVERTTKELL SDLATNREQY KSNPSAFYDA 
LNRIVGPVVD ADGISKSIMT VKYSRKASPE QVKRFEENFK RSLMQFYGNA LLEFNNQGIT
VAPAKDEGDD RTSVDMQVKG NNGAVYPVSY TLVKLNGEWK VRNVVINGIN IGKLFRDQFA
DAMQRNGNNL DTTINNWAGE VAKTKSTVDA TQKPVQ