Gene Psyr_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4123 
Symbol 
ID3369660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4912176 
End bp4913525 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID637654481 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_237191 
Protein GI66047350 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC GTATCCTGAC CGGTATCACG ACCACCGGCA CTCCCCATCT GGGCAACTAC 
GCGGGCGCCA TTCGCCCGGC CATTGTCGCC AGCCGTCAGA GCGATTTCGA CTCGTTCTAC
TTTCTGGCCG ACTACCACGC GCTGATCAAA TGCGATGACC CGCTGCGCAT TCAGCGCTCG
CGTCTGGAAA TCGCCGCGAC CTGGCTGGCA GCGGGGCTGG ACGTTGATCG TGTGACCTTC
TATCGCCAGT CGGACATCCC TGAAATCCCG GAACTGACCT GGCTGCTCAC CTGCGTCGCG
GCCAAGGGCC TGCTCAATCG CGCCCACGCC TACAAGGCGT CGGTAGACAA GAACGTGGAA
GGTGGTGAAG ACCCGGATGC AGGCATCACC ATGGGGCTGT ACAGCTACCC GGTGCTGATG
GCTGCCGACA TCCTGATGTT CAATGCGCAT CAGGTTCCGG TAGGCCGCGA TCAGATTCAG
CACGTTGAAA TGGCACGCGA CATCGGCCAG CGTTTCAATC ACCTGTTCGG CAATGGCAAG
GAATTCTTCG TCATGCCCGA GGCGCTGATC GAAGAGAGCG TGGCGACGCT GCCCGGTCTG
GACGGTCGCA AGATGTCCAA GAGCTACGAC AACACCATCC CGTTGTTCAG CGCTGCCAAG
GACATGAAAG GCGCGATATC GCGCATCGTC ACCGACTCAC GTGCGCCGGG TGAAGCAAAA
GACCCGGACA CCTCGCACCT GTTTACCCTG TATCAGGCCT TCTCGACCGC CGAGCAGTGC
GCTGAATTCC GTTCCGACCT GTTGCAGGGC CTGGGTTGGG GTGAAGCCAA GAATCGTCTG
TTCACGTTGC TGGATGCGCA GCTTAGCGAG CCCCGTGAAA AGTATCTGGG GCTGATCGAG
CGTCCTGCCG ATCTCGAAGA CATCCTGCTC GCTGGCGCAC AGAAAGCCCG ACGTGTCGCC
ACCCCTTTCC TCGAAGAGTT GCGCGAGGCG GTGGGCCTGC GGTCGTTCCG TACCGTGGTG
CAGAACGCCG ACACCGGCAA GAAGAAGGCC ACTAAAGGCG CCCGTTTCGT CAGCTTCCGT
GAAGACGACG GCAGCTTCCG TTTCCGTCTG CTGGCAGCCG ATGGCGAGCA GTTGCTGTTG
TCGCGCAATT TTGCCGATGG CAAGGCGGCT GGCGTGGTCA GCAAGCAGTT GCAGCAGGGC
GGTGAACTGG ACCTGCGCAG CGAAGACGAT CGCTTCACGC TGTGGCTGAA CGGCGCCTGT
GTGGCGGACA GTCCGGTATT CGCCGACGCT GCCACGCGCG ACAGTGCCAT CGAAACGCTC
AAGCTGGCGC TCGCTCCCCA ACAGGACTGA
 
Protein sequence
MTTRILTGIT TTGTPHLGNY AGAIRPAIVA SRQSDFDSFY FLADYHALIK CDDPLRIQRS 
RLEIAATWLA AGLDVDRVTF YRQSDIPEIP ELTWLLTCVA AKGLLNRAHA YKASVDKNVE
GGEDPDAGIT MGLYSYPVLM AADILMFNAH QVPVGRDQIQ HVEMARDIGQ RFNHLFGNGK
EFFVMPEALI EESVATLPGL DGRKMSKSYD NTIPLFSAAK DMKGAISRIV TDSRAPGEAK
DPDTSHLFTL YQAFSTAEQC AEFRSDLLQG LGWGEAKNRL FTLLDAQLSE PREKYLGLIE
RPADLEDILL AGAQKARRVA TPFLEELREA VGLRSFRTVV QNADTGKKKA TKGARFVSFR
EDDGSFRFRL LAADGEQLLL SRNFADGKAA GVVSKQLQQG GELDLRSEDD RFTLWLNGAC
VADSPVFADA ATRDSAIETL KLALAPQQD