Gene Psyr_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4117 
Symbol 
ID3369654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4907354 
End bp4907773 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content57% 
IMG OID637654475 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_237185 
Protein GI66047344 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA GTCGCCCTTA TCTTGTTCGT GCTCTCTATG AGTGGATCGT CGATAACGAT 
TGCACCCCGC ATGTGCTGGT CAATGCGGAT TACCCGTCGG TGCAGGTCCC GCAAGGGTTT
GCCAATGACG GGCAGATTGT CCTGAATGTT TCGCCCAGTG CCGTGCGTCA TCTGCATATG
GATAACGAAG CGGTCAGTTT CGAAGGCCGC TTCGGCGGTG TGCCGCACAC GCTTTACGTA
CCTGTCGCTG CCATCCTGGG TATTTATGCC CGCGAGAACG GTCAGGGCAT GGTTTTCGAT
CTGGAGCCTT CCATGGAAGA GGGCGAGGAA ATCGAGATCG AGATCGAAGA CGATACGCCT
CCGCCAGACA GCGAACCGCC ACGTCCGAGT GGCAGGCCGA GTCTGAAGGT CGTGAAGTAA
 
Protein sequence
MNSSRPYLVR ALYEWIVDND CTPHVLVNAD YPSVQVPQGF ANDGQIVLNV SPSAVRHLHM 
DNEAVSFEGR FGGVPHTLYV PVAAILGIYA RENGQGMVFD LEPSMEEGEE IEIEIEDDTP
PPDSEPPRPS GRPSLKVVK