| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4112 |
|---|
| Symbol | |
|---|
| ID | 3369649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4902628 |
|---|
| End bp | 4903542 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637654470 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237180 |
|---|
| Protein GI | 66047339 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.796343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTTT TCCAAGTGCC TGTTTTAACC TGCGAGGTTT GCGTTTTGAC TGTTCCGGTT
GTTTCGAATT CCACTTCGGG TTCGCTTTAT GTAGTGGCGA CTCCTATCGG CAATCTGGAC
GACATGAGCG TGCGAGCCCT GAAGGTGTTG CGTGAGGTCG CGCTGATTGC GGCTGAAGAC
ACGCGTCATT CCGCACGGCT GATGCAGCAT TTCGGCATCT CTACGCCATT GGCGGCCTGT
CACGAACATA ATGAACGTGA TGAGGGTAGT CGGTTCATCA CGCGTCTGCT GGCCGGTGAT
GACGTCGCAC TGATTTCCGA TGCGGGCACG CCACTGATCT CCGATCCCGG TTACCACCTG
GTGCGCCAGG CGCGCGCCGC GGGTGTGCCG GTCGTACCGG TGCCGGGCGC GTGCGCCTTG
ATCGCAGCGC TGTCTGCGGC CGGGCTGCCG TCGGATCGAT TCATTTTCGA AGGCTTTCTT
CCGGCCAAGT CTGCCGGTCG CAAGGCCAGG CTTGAGCGTG TCAGGGAAGA GCCGCGCACG
CTGATCTATT ATGAGGCGCC GCACCGCATC CTGGAGTGTC TGCAGGATAT GGAACTGGTC
TTCGGTGCTG ACCGTCAGGC GTTGCTGGCG CGTGAAATAA CCAAAACTTT CGAAACCCTC
AAGGGTCTGC CTTTAGGTGA GCTGCGGGCG TTCGTCGAAT CCGACAGTAA TCAGCAGCGT
GGCGAGTGCG TCGTGCTGGT GGCGGGCTGG ACGCCGCCGG ATGACGAGGA CGTCATCGGT
GATGAGGCCC GCAGGGTGCT GGATTTGCTG CTTGCCGAGA TGCCGCTCAA GCGCGCCGCA
GCGCTGGCTG CCGAAATAAC CGGCGTGCGC AAGAACCTGC TGTATCAGGT GGCGCTGGAA
AAACAGAAGG AGTAA
|
|---|
| Protein sequence | MHFFQVPVLT CEVCVLTVPV VSNSTSGSLY VVATPIGNLD DMSVRALKVL REVALIAAED
TRHSARLMQH FGISTPLAAC HEHNERDEGS RFITRLLAGD DVALISDAGT PLISDPGYHL
VRQARAAGVP VVPVPGACAL IAALSAAGLP SDRFIFEGFL PAKSAGRKAR LERVREEPRT
LIYYEAPHRI LECLQDMELV FGADRQALLA REITKTFETL KGLPLGELRA FVESDSNQQR
GECVVLVAGW TPPDDEDVIG DEARRVLDLL LAEMPLKRAA ALAAEITGVR KNLLYQVALE
KQKE
|
|---|
| |