Gene Psyr_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4108 
Symbol 
ID3369644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4898461 
End bp4900191 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content61% 
IMG OID637654466 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_237176 
Protein GI66047335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC TTGATGGCGC TCTTTATCCG TGGCGTTTTC GCGTAGTCGT GGGGCTGCTG 
GTGTCCCTCG TGCTCGCCAT TTGCTGGCGC ATTGTCGACC TGCAGGTCAT CGACCATACC
TTTCTCAAGG AACAGGGCGA TGCACGCAGC CTTCGGCATA TCCCTATTCC GGCGCACCGT
GGCCTGATCA CCGACCGTAA CGGCGAGCCG CTGGCGGTCA GTACTCCGGT GACGACGCTG
TGGGCCAACC CGCGTGAAAT GCAGCAGGAC AAGTCCAAGT GGCCGATGCT GGCCGCCGCG
CTGGGCCAGG ATCTCAAGGC ATTGACCGAG CGTCTGGACT CGCAGGCGAA CAAGGAATTC
ATCTACCTGG TCCGTGGCCT GACGCCAGAA CAGGGCCAGT CGGTCATCGA TCTGAAAGTG
CCCGGCGTTT ACGGCATCGA AGAGTTCCGC CGCTTTTATC CGGCCGGCGA TGTCACCGCA
CACATGGTCG GCTTTACCGA CCTTGACGAC CATGGCCGGG AAGGCGTCGA GCTGGCCTAT
GACGACTGGC TCGCCGGTGT GCCCGGCAAG CGTCAGGTCA TCAAGGACCG GCGCGGCCGA
CTGATCAAGG ATGTTCAGGT CACCAAGAAT GCCAAGGCCG GAAAGACCTT GGCTTTGTCT
ATTGACCTGC GCCTGCAGTA CCTGGCGACC CGTGAACTGC GCAATGCCAT CGTCGAGAAC
GAGGCCAAGG CCGGCAGCAT GGTGATCATG GACGTCAAGA CCGGTGAGGT TCTGGCGATG
GTCAACCAGC CGACCTATAA CCCGAACAAC CGTCGCACCA TGGTGCCTGC CGCCATGCGC
AACCGGGCCA TCATCGACGT GTTCGAACCC GGTTCGACCA TGAAGCCGAT CTCCATGACC
GCAGCGCTGG ACAGTGGCCG CTGGAAGCCG ACCGACAAGG TCGAGGTTTA TCCGGGCACC
CTGCAGATCG GCAAGTACAC GATTCGTGAC GTGACCAAGA CCGAAGGCCC GATCCTCGAT
CTGACCGGCA TTCTGATCAA CTCCAGTAAC GTCGGCATGA GCAAGGTTGC GTTTGATGTG
GGCGGTGAGG CGATCTTCCG TGCCATGCAG CGCGTCGGTT TCGGTCAGTA CACCGGTCTC
GGCTTCCCTG GCGAGCGCGT CGGCAACCTG CCCAACTACC GTGAATGGCG CAAGGCCGAA
ACCGCCACGC TGTCCTATGG CTACGGTCTG TCGGTCACGG CCTTGCAGCT GGTGCATGCC
TACGGCGCGC TGGCCAACAA TGGCCGCATC GTGCCGTTGA CCATCCTGAA AACAGATAAA
GAGCCGGAGT CGACCCAGGC CATTCCGGAG AAAACCGCGA AGACCCTGCA AGGCATGTTG
CAGCAGGTTA TCGAGGACCC ACGCGGCGTC TATCGCGCCC GTGTGCCGTC CTACCACGTC
GGCGGCAAGA GTGGTACGGC GCGCAAGACG TCCATTGGCA CCAAGGGCTA TGCGGAAAAT
TCCTATCGCT CGCTGTTCGC CGGTTTCGGC CCGATGAGTA ACCCGCGTTA CGCCATCGTG
GTGGTCATCG ACGAGCCGAG CAAGGGTGGT TACTACGGTG GTCTGGTTTC GGCCCCGGTA
TTCAGCAAGG TCATGTCCGG CACGTTGCGT CTGATGAACG TGACGCCGGA CAACCTTGCG
CCACCTGAAC AAGTCAACGC CGCACCGGCA GCCAAAGGAG GGCGTGGTTG A
 
Protein sequence
MMKLDGALYP WRFRVVVGLL VSLVLAICWR IVDLQVIDHT FLKEQGDARS LRHIPIPAHR 
GLITDRNGEP LAVSTPVTTL WANPREMQQD KSKWPMLAAA LGQDLKALTE RLDSQANKEF
IYLVRGLTPE QGQSVIDLKV PGVYGIEEFR RFYPAGDVTA HMVGFTDLDD HGREGVELAY
DDWLAGVPGK RQVIKDRRGR LIKDVQVTKN AKAGKTLALS IDLRLQYLAT RELRNAIVEN
EAKAGSMVIM DVKTGEVLAM VNQPTYNPNN RRTMVPAAMR NRAIIDVFEP GSTMKPISMT
AALDSGRWKP TDKVEVYPGT LQIGKYTIRD VTKTEGPILD LTGILINSSN VGMSKVAFDV
GGEAIFRAMQ RVGFGQYTGL GFPGERVGNL PNYREWRKAE TATLSYGYGL SVTALQLVHA
YGALANNGRI VPLTILKTDK EPESTQAIPE KTAKTLQGML QQVIEDPRGV YRARVPSYHV
GGKSGTARKT SIGTKGYAEN SYRSLFAGFG PMSNPRYAIV VVIDEPSKGG YYGGLVSAPV
FSKVMSGTLR LMNVTPDNLA PPEQVNAAPA AKGGRG