Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4106 |
Symbol | |
ID | 3369642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4895635 |
End bp | 4897005 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654464 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
Protein accession | YP_237174 |
Protein GI | 66047333 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAGC CAATGACCTT CCGCGAACTG GTTGTACCAC TCGACGCCCG TCTGGTCGGC GGCGACTGCA GCTTTGCCGG CGTGAGCACC GACAGTCGTG GCATCGAGCC TGGGCAACTG TTCGTGGCCC TGACCGGCCC GCGTTTCGAC GGTCATGAAT ACCTCGACCA AGTGGCTGCC AAAGGTGCGG TCGGTGCGCT GGTCGAGCGC GAAGTGCAGG GCGCCGCCTT GCCGCAACTG GTCGTGCTGG ATACCCGCAA GGCACTTGCC CAGCTGGGTG CCATGAATCG CAATGCGTTC GTCGACCGGC CGGTTGCTGC CGTCACCGGG TCGAGTGGCA AAACCACGGT CAAGGAGATG CTCGCGAGCA TCCTGCGCAC GCGCGGGCCT GTGCTGGCGA CCCGAGGCAA CCTGAACAAC GAATTGGGCG TTCCACTGAC GCTGCTGGAA CTGGCTCCCG AATACACGTC CGCTGTGATC GAACTGGGTG CATCGCGGGT TGGCGAGATT GCCTACACCG TGAGCCTTGC CAAGCCGCAC GTCGCCATGA TTACCAACGC CGGCACCGCC CATGTTGGCG AGTTTGGCGG CCCGGACAGG ATTGTCGAAG CCAAGGGCGA GATTCTGGAA GGTCTCGACG CGGGTGGCAC TGCAGTCTTG AACCTGGAAG ACAAGGCGTT TCCGATCTGG CGCAAGCGCG CCGGCAATCG CAATATCCTG ACCTTCGCAC TGACCGACTC TGCAGCGGAT GTGTACGCCA GCGAGCTCAG CCGTGATGCT CGGGGCTGCC CGGCTTTCAA CCTCAACAGC CCGCTCGGCA CCGCCCGGGT TCAGCTGAAC CTGCTCGGCA CGCACAATGT GTCCAACGCC CTGGCCGCTG CGGCTGCCGG CTGCGCAATG GGTGTGCCGC TGGAAGGGAT CGTTACCGGG CTGAACAACG TGCAGCCGGT CAAGGGCCGT GCCGTGGCGC AAATCGCCAG CAATGGCACG CGCGTCATTG ATGATACTTA CAACGCCAAC CCTGCCTCGA TCAACGCGGC CGTCGACATC CTCACCGGCT TCACCGGTCG TACCGTACTG GTGCTGGGCG ATATCGGCGA GCTGGGCGAC TGGGCCGAGC AGGGCCATCG CGAAGTCGGT GCCTATGCCG CTGGCAAGGT GTCGGCGCTG TATGCCGTCG GCCCGTTGAT GACTCACGCC GTCAGCGCCT TTGGCGAGCA CGCTTACCAC TTTGCCAGTC AGGCTGAACT GATTGCGGCG CTGGGCGCCG AGCAGGACCC CGATACCACT TTACTGATCA AGGGCTCGCG TAGCGCTGCG ATGGAACACG TCGTGGCTGC CTTGTGCGGT TCTAGCCTGG AGAAACATTA A
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Protein sequence | MLKPMTFREL VVPLDARLVG GDCSFAGVST DSRGIEPGQL FVALTGPRFD GHEYLDQVAA KGAVGALVER EVQGAALPQL VVLDTRKALA QLGAMNRNAF VDRPVAAVTG SSGKTTVKEM LASILRTRGP VLATRGNLNN ELGVPLTLLE LAPEYTSAVI ELGASRVGEI AYTVSLAKPH VAMITNAGTA HVGEFGGPDR IVEAKGEILE GLDAGGTAVL NLEDKAFPIW RKRAGNRNIL TFALTDSAAD VYASELSRDA RGCPAFNLNS PLGTARVQLN LLGTHNVSNA LAAAAAGCAM GVPLEGIVTG LNNVQPVKGR AVAQIASNGT RVIDDTYNAN PASINAAVDI LTGFTGRTVL VLGDIGELGD WAEQGHREVG AYAAGKVSAL YAVGPLMTHA VSAFGEHAYH FASQAELIAA LGAEQDPDTT LLIKGSRSAA MEHVVAALCG SSLEKH
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