| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4096 |
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| Symbol | lpxC |
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| ID | 3369632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4884064 |
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| End bp | 4884975 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637654454 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_237164 |
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| Protein GI | 66047323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.615033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.246274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAAAC AACGCACCCT GAAAAATATT ATCCGTGCCA CAGGTGTAGG CCTGCACTCC
GGGGAGAAGG TTTACCTGAC CCTCAAGCCC GCACCTGTGA ATACCGGCAT TGTGTTTTGC
CGAGCTGACC TTGACCCCGT CGTGCAGATC CCTGCGCGTG CGGAAAACGT CGGTGACACC
ACTCTGTCGA CCACTCTGGT CAATGGTGAT GTCAAAGTCG ACACGGTAGA ACACTTGCTC
TCGGCCATGG CTGGCCTTGG CATCGATAAC GCCTACGTCG AGCTCTCTGC CTCCGAAGTT
CCTATCATGG ACGGCAGCGC AGGCCCTTTC GTATTCCTGA TTCAATCGGC AGGCCTGGAA
GAACAGGACG CGCCGAAGAA ATTCATCCGT ATCCTGCGTG AAGTCACGGT GGAGGAGGGC
GGTAAACGCG CTACCTTCGT GCCTTTCGAA GGGTTCAAGG TCAGTTTCGA GATCGATTTC
GATCACCCCG TCTTCCGTGA CCGCACCCAG AGTGCAAGCG TGGACTTTTC CAGCACTTCC
TTTGTGAAGG AAGTCAGCCG TGCCCGGACC TTCGGGTTCA TGAGTGATAT CGAGTACCTG
CGCAAGCACA ACCTCGCACT CGGCGGCAGC GTGGAAAACG CCATCGTGGT CGACAAGGAC
GGTGTACTGA ACGAAGACGG CCTGCGTTAC GAGGACGAAT TCGTCAAACA CAAAATCCTC
GACGCCATCG GTGACCTCTA CCTGCTGGGC AACAGCCTGA TAGGTGAGTT CCGGGGTTTC
AAATCGGGGC ATGCACTGAA CAACCGTCTG CTGCGCACGT TGATCGAGCA GAAAGACGCT
TGGGAAGTGG TGACTTTCGA GGATGCCAGT ACGGCACCAA TTTCTTACAT GCGCCCTGTC
GCGGCCGTGT AA
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| Protein sequence | MIKQRTLKNI IRATGVGLHS GEKVYLTLKP APVNTGIVFC RADLDPVVQI PARAENVGDT
TLSTTLVNGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLE
EQDAPKKFIR ILREVTVEEG GKRATFVPFE GFKVSFEIDF DHPVFRDRTQ SASVDFSSTS
FVKEVSRART FGFMSDIEYL RKHNLALGGS VENAIVVDKD GVLNEDGLRY EDEFVKHKIL
DAIGDLYLLG NSLIGEFRGF KSGHALNNRL LRTLIEQKDA WEVVTFEDAS TAPISYMRPV
AAV
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