| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4094 |
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| Symbol | secA |
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| ID | 3369630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4880445 |
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| End bp | 4883186 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654452 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_237162 |
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| Protein GI | 66047321 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.843066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTGAA AAAACTTTTT GGAAGCAAGA ACGAGCGTGA AGTAAAACGC
ATGCTCAAGA CGGTACAGAT CGTCAATGCC TTCGAAGAGC AAATGGTGGC CCTTTCGGAC
GAGCAACTGC GCGCCAAGAC CGAAGAGTTC AAGGCCCGCA TAGCCAAAGG CGAAACCCTC
GATCAATTGC TCCCGGAAGC CTTTGCTGTC GCTCGTGAAG CGGGCAAGCG CGTCATGGGC
ATGCGCCACT TCGACGTCCA GTTGATCGGC GGCATGACCC TGCACGAAGG TCAGATCGCG
GAAATGCGTA CCGGTGAAGG TAAAACCCTG GTCGGTACGC TGGCTGTCTA CCTCAACGCA
TTGTCCGGCA AGGGCGTTCA CGTGGTTACC GTGAACGACT ACCTCGCTCG TCGCGACGCC
AACTGGATGC GTCCGCTGTA CGAATTCCTC GGTCTGACCG TAGGCATCGT CACGCCATTC
CAGCCGCCGG AAGAGAAGCG CGCCGCCTAC GCTGCCGATA TCACGTACGG CACCAACAAC
GAATACGGTT TCGATTACCT GCGCGACAAC ATGGCGTTCA GCATGGACGA CAAGTTCCAG
CGTGAACTCA ATTTTGCCGT GATCGACGAA GTCGACTCGA TTCTGATCGA CGAAGCGCGT
ACGCCGCTGA TCATCTCCGG TCAGGCTGAA GACAGCTCCA AGCTGTACAC CGAAATCAAC
CGCCTGATCC CCAAGCTCGA GCAGCATATC GAGGAAGTGG AAGGCGAAGT CACCAAGGCG
GGTCATTTCA CCGTTGACGA GAAAACCCGT CAGGTCGAAC TGAACGAAGC CGGTCACCAG
TTCATCGAGG AAATGCTCAC CGAAGTCGGC CTGCTGGCCG AAGGCGAGAG CCTCTACTCG
GCGCATAACC TGGGCCTGCT GACTCACGTC TATGCCGGTC TGCGTGCGCA CAAGCTGTTC
AACCGCAACG TCGAATACAT CGTTTCGGAT GGTCAGGTGC TGCTGGTTGA CGAACACACC
GGCCGGACCA TGCCGGGCCG TCGCCTGTCC GAAGGTCTGC ACCAGGCCAT CGAAGCCAAG
GAAGGTCTGA ACATTCAGGC CGAAAGCCAG ACCCTGGCAT CGACCACGTT CCAGAACTAC
TTCCGTCTGT ACAACAAGCT GTCCGGCATG ACCGGTACCG CCGACACCGA AGCGTTCGAA
TTCCACCAGA TCTACAACCT GGCCGTCATG GTCATCCCGC CGAACAAGCC TTTGGCGCGT
AAGGACTTCA ACGACCTGGT CTATCTGACG GCGGAAGAGA AGTACGCCGC CATCGTCACC
GACATCAAGG CCTGCATCGC GGAAAACCGT CCGGTACTGG TCGGTACGGC GACCATCGAA
ACTTCCGAGC ACATGTCCAA TCTGCTCAAC AAGGAAGGCA TCGAGCACAA GGTTCTGAAC
GCCAAGTTCC ACGAAAAGGA AGCGGAAATC ATTGCGCAGG CCGGTCGTCC GGGTGCGTTG
ACCATCGCCA CCAACATGGC CGGTCGTGGT ACCGACATCC TGCTGGGCGG CAACTGGGAA
GTCGAGGTCG CCAATCTCGA AGACCCGACT CCCGAGCAGA TCGCGCAGAT CAAGGCTGAC
TGGCAGAAGC GCCATCAGCA GGTGATCGAA GCGGGCGGCC TGCATGTTAT CGCCTCCGAG
CGTCACGAAT CGCGTCGTAT CGACAACCAG CTGCGCGGTC GTGCCGGCCG TCAGGGCGAC
ACCGGCTCCA GCCGTTTCTA CCTGTCGCTC GAAGACAGCC TGATGCGCAT CTTTGCCTCT
GACCGGGTGA AGAACTTCAT GAAGGCGCTG GGCATGCAGT CCGGCGAAGC GATCGAGCAT
CGCATGGTGA CCAACGCCAT CGAAAAAGCG CAGCGCAAGG TGGAAGGTCG TAACTTCGAC
ATCCGCAAAC AGTTGCTTGA ATTCGATGAC GTGGCCAACG AGCAGCGTAA AGTGATTTAT
CACATGCGTA ACACGTTGCT GGCTGCCGAG AACATTGGCG AGACCATTGC CGACTTCCGC
GAGGAAGTGC TCAACAACCT GATCAGCCAG CATATTCCGC CACAGTCCCT GCCGGAGCAG
TGGAATGTTG CAGGCCTGGA ATCGGCGCTC AATACCGACT TCGCGGTTCA ACTGCCGATC
CAGCAGTGGC TCGACGAAGA CGACAAGCTG CACGAAGACA GCCTGCGCGA AAAAATCATG
GCGCAGTTGC TGGTGGCGTA CAACGAGAAG GAAGACCAGG CCAGCGCCGA AGCGCTGCGC
TCCTTCGAGA AGCAGATCCT CCTGCGCGTG CTGGACGACC TGTGGAAAGA TCACCTGTCG
ACCATGGACC ACCTGCGTCA CGGTATTCAC CTGCGCGGCT ACGCTCAGAA GAACCCGAAG
CAGGAATACA AGCGCGAGTC CTTCACGCTG TTCCAGGAAC TGCTGGATTC GATCAAGCGC
GACACCATCC GTGTGCTCTC GCATGTTCAG GTTCGTCGCG AAGATCCAGA GGAAGAAGAG
GCACGCCTGC GTCAGGACGC CGAAGAGCTG GCCAGTCGCA TGCAGTTCGA ACACGCGCCT
GCACCGGGCA TCGAACAGCC GCTGCTCGAC GAAGAGGGTG GCGGAGCGCC TGTTGCCGTT
GCATCCGAGC CGGTTCGCAA CGACCAGAAA CTGGGTCGCA ACGAGCTGTG CTGGTGTGGT
TCGGGCAAGA AATTCAAGCA CTGTCACGGC CAGATCAACT AA
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| Protein sequence | MFAPLLKKLF GSKNEREVKR MLKTVQIVNA FEEQMVALSD EQLRAKTEEF KARIAKGETL
DQLLPEAFAV AREAGKRVMG MRHFDVQLIG GMTLHEGQIA EMRTGEGKTL VGTLAVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLTVGIVTPF QPPEEKRAAY AADITYGTNN
EYGFDYLRDN MAFSMDDKFQ RELNFAVIDE VDSILIDEAR TPLIISGQAE DSSKLYTEIN
RLIPKLEQHI EEVEGEVTKA GHFTVDEKTR QVELNEAGHQ FIEEMLTEVG LLAEGESLYS
AHNLGLLTHV YAGLRAHKLF NRNVEYIVSD GQVLLVDEHT GRTMPGRRLS EGLHQAIEAK
EGLNIQAESQ TLASTTFQNY FRLYNKLSGM TGTADTEAFE FHQIYNLAVM VIPPNKPLAR
KDFNDLVYLT AEEKYAAIVT DIKACIAENR PVLVGTATIE TSEHMSNLLN KEGIEHKVLN
AKFHEKEAEI IAQAGRPGAL TIATNMAGRG TDILLGGNWE VEVANLEDPT PEQIAQIKAD
WQKRHQQVIE AGGLHVIASE RHESRRIDNQ LRGRAGRQGD TGSSRFYLSL EDSLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEFDD VANEQRKVIY
HMRNTLLAAE NIGETIADFR EEVLNNLISQ HIPPQSLPEQ WNVAGLESAL NTDFAVQLPI
QQWLDEDDKL HEDSLREKIM AQLLVAYNEK EDQASAEALR SFEKQILLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFTL FQELLDSIKR DTIRVLSHVQ VRREDPEEEE
ARLRQDAEEL ASRMQFEHAP APGIEQPLLD EEGGGAPVAV ASEPVRNDQK LGRNELCWCG
SGKKFKHCHG QIN
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