Gene Psyr_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4093 
SymbolargJ 
ID3369629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4879118 
End bp4880335 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID637654451 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_237161 
Protein GI66047320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.671486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG GTCTTGGTCC TTTGCCTGCG TTGCACCCGG TTCCCGGTTT TGAACTTGGC 
ATTTCTTCTG CCGGCATCAA ACGCCCGGGG CGCAAGGATG TTGTGGTCAT GCGCTGTGCC
GAAGGCTCCA GCGTTGCCGG TGTTTTCACC TTGAATGCGT TCTGCGCAGC GCCGGTCATT
CTGGCCAAAC AGCGCGTCCA GGGCACTGTG CGTTATCTGC TGACCAACAC CGGCAATGCC
AATGCGGGCA CCGGCGAGCC GGGTCTGGCT GCGGCGCGTC GTACTTGCGA GAAGCTGGCG
CAACTGACTG GCGTCGATGC TTCGGCGGTG CTGCCGTACT CGACGGGCGT GATCGGCGAG
CCGCTGCCGG TGGAAAAGAT CGAAGGCGCT CTGCAAGCCG CGATCGATGA TCTGTCTGTG
GATAACTGGG CCGCTGCGGC GACCGGGATC ATGACCACCG ACACCCTGCC CAAAGGCACC
AGCCGTCAGT TCAGCCATGA CGGCGTGACC GTCACTGTGA CCGGCATCAG CAAGGGCGCA
GGCATGATTC GCCCGAACAT GGCGACCATG CTCGGTTACA TCGCCACCGA CGCCAAAGTG
GCGCAGAGCG TGCTTCAGGA CCTGATTCGT GACGGCGCCA ACAAGTCGTT CAACCGCATC
ACCATCGATG GCGACACCTC GACCAACGAT TGCTGCATGC TGATCGCCAC CGGTCAGGCT
GACCTGCCGG AAATTACCGA GGCCAAAGGC CCGTTGTTCG AAGCGTTGAA GAAAGCCGTG
TTCGACGTGT GCATGGAGGT CGCTCAGGCC ATCGTGCGTG ACGGTGAGGG TGCGACCAAG
TTCGTGACCG TGGAAGTCAA CGGTGGCGGC AATCACCAGG AATGCCTGGA CGTCGGCTAT
GCCGTGGCCC ACTCGCCGCT GATCAAGACC GCGTTGTTCG CCTCCGACCC GAACTGGGGA
CGTATCCTGG CGGCGGTCGG CCGTGCCGGT GTGCCGGATC TGGACGTGAG CAAGATCGAC
GTATTCCTGG GGGGAGTATG CATCGCCAGC CAGGGCTGCC GCGCCACGAC CTACACCGAA
GAGCAGGGCT CGGCGGTGAT GGCCGAAGAA GAAATCACTA TCCGTATCGA GCTGGGCCGC
GGCGATTGCA GCGAAACGAT CTGGACCACC GATCTTTCTC ACGAGTACGT GAAGATCAAT
GCGGAATACC GCACCTGA
 
Protein sequence
MAVGLGPLPA LHPVPGFELG ISSAGIKRPG RKDVVVMRCA EGSSVAGVFT LNAFCAAPVI 
LAKQRVQGTV RYLLTNTGNA NAGTGEPGLA AARRTCEKLA QLTGVDASAV LPYSTGVIGE
PLPVEKIEGA LQAAIDDLSV DNWAAAATGI MTTDTLPKGT SRQFSHDGVT VTVTGISKGA
GMIRPNMATM LGYIATDAKV AQSVLQDLIR DGANKSFNRI TIDGDTSTND CCMLIATGQA
DLPEITEAKG PLFEALKKAV FDVCMEVAQA IVRDGEGATK FVTVEVNGGG NHQECLDVGY
AVAHSPLIKT ALFASDPNWG RILAAVGRAG VPDLDVSKID VFLGGVCIAS QGCRATTYTE
EQGSAVMAEE EITIRIELGR GDCSETIWTT DLSHEYVKIN AEYRT