Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4067 |
Symbol | |
ID | 3369603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4850956 |
End bp | 4851678 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654425 |
Product | lipopolysaccharide kinase |
Protein accession | YP_237135 |
Protein GI | 66047294 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.424153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTTGC AGTCCGTGAA AGAACCAGTT GTGAACCCGA TCCAGAATGA GTTCGATCAG TTCTGGAGCC AGCGTGGCGA ATGGGTTGAA GAACCCAATG TGCGTCGCGG TGGCGAAAGT GGTGTGCAGC GGCTGGTCAT GGACGATGGG CAGACCCTTT ATGCCAAGCG TCAGACAGGT CATATCTACC GCAGTCTGCT GCACCCGCTG GGCCGACCCA CCGTACTGCG CGAGCGCGAG GCGCTTGAAG GCCTGCGCAA GCTTGGCGTC GTCGTTCCCG AAGTGGTGTT TTGCGGTGCT GAACGCGGTG AGGACAACGC CTGGAGGGCA TTGCTGGTCA CCGTGGCGCT GGAAGGCTTC GAGGAAATTG AAAAGTGGCA GGCTGCCGGA GGGCGCGAGC GCCATGGCGA GCTGTTCTAT GAGCGGGTGC TCAAGGAAGT GGCAGCCACG CTGGCGCGCA TGCACCTGGG TCGCTGGCAG CACAGCTGTC TGTACATCAA GCACATTTTC GTGCGCGTGA CAGGGGAAGG GCCGGACGCC AATGTCGAGG TCGCCTTGCT CGATCTCGAG AAGGGCCGTC GTCGCCTTAC CGCTCAAGGC GCAGCCCAGC ATGATATGAA ACAGCTACGA CGCCATTCGT CATTCAGCGC TGCAGACTGG CAGAAGTTGA TCTACTTTTA TCAGGCAGCG TTTGGCAGCT CTATCAAAGG TTTAGAGTCA TGA
|
Protein sequence | MGLQSVKEPV VNPIQNEFDQ FWSQRGEWVE EPNVRRGGES GVQRLVMDDG QTLYAKRQTG HIYRSLLHPL GRPTVLRERE ALEGLRKLGV VVPEVVFCGA ERGEDNAWRA LLVTVALEGF EEIEKWQAAG GRERHGELFY ERVLKEVAAT LARMHLGRWQ HSCLYIKHIF VRVTGEGPDA NVEVALLDLE KGRRRLTAQG AAQHDMKQLR RHSSFSAADW QKLIYFYQAA FGSSIKGLES
|
| |