| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4059 |
|---|
| Symbol | |
|---|
| ID | 3369595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4841455 |
|---|
| End bp | 4842036 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637654417 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_237127 |
|---|
| Protein GI | 66047286 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTG AATTGCCGCC ACTGCCCTAC GAAAAAACAG CTCTGGCGCC GCACATTTCT
GCGGAGACTC TGGAATATCA CCACGACAAG CACCACAACA CCTACGTCGT GAACCTGAAC
AACCTGGTGC CTGGCACCGA GTTCGAAGGC AAGACCCTGG AAGAGATCGT CAAGACTTCT
TCGGGCGGTA TCTTCAACAA CGCCGCTCAG GTCTGGAACC ACACGTTCTA CTGGAACTGC
CTGGCCCCTA ACGCTGGCGG CGAGCCTACC GGCGCTCTGG CCGAAGCCAT CAACAAGGCG
TTCGGTTCCT TCGACAAGTT CAAGGAAGAG TTCAGCAAGA CTTCTATCGG CACTTTCGGC
TCCGGCTGGG GCTGGCTGGT GAAGAAGGCT GACGGCTCCC TGGCACTGGC CAGCACCATC
GGTGCCGGCA ACCCGTTGAC CAGCGGCGAC ACCCCGCTGC TGACCTGCGA TGTCTGGGAA
CACGCCTACT ACATCGACTA TCGCAACCTG CGTCCGAAGT ACGTGGAAGC GTTCTGGAAC
CTGGTGAACT GGGACTTCGT GGCCAAGCAA TTCGCCTCCT GA
|
|---|
| Protein sequence | MAFELPPLPY EKTALAPHIS AETLEYHHDK HHNTYVVNLN NLVPGTEFEG KTLEEIVKTS
SGGIFNNAAQ VWNHTFYWNC LAPNAGGEPT GALAEAINKA FGSFDKFKEE FSKTSIGTFG
SGWGWLVKKA DGSLALASTI GAGNPLTSGD TPLLTCDVWE HAYYIDYRNL RPKYVEAFWN
LVNWDFVAKQ FAS
|
|---|
| |