| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4058 |
|---|
| Symbol | |
|---|
| ID | 3369594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4840661 |
|---|
| End bp | 4841263 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637654416 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_237126 |
|---|
| Protein GI | 66047285 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAA GCTACTTCAA CGGATTGCTG ATCGCCGCTG GCCTGATCAT GGCCATTGGC
TCGCAGAACG CATTCGTACT GGCTCAGGGG CTGCGCCGTG AACACCACGT GTCAGTCGCG
ATGCTCTGCA TTATCTGCGA TGCCATTCTG GTCGCCGCCG GGGTGTTCGG TCTGGCCAAT
GTGCTGGCGC AAAACCCGAC CCTGCTGGCG GTGGCGCGCT GGGGCGGTGT GCTATTCCTC
AGTTGGTATG GCGTGCAGGC ACTGCGCCGG GCCTGCTCGA AGCAGAGCCT CGAACACGGT
GCCGCGGCTG GCAAAAGATC GCGCCGCACG GTACTGCTCA GCGCATTGGC CGTGACGTTG
CTCAACCCGC ATGTGTACCT GGACACCGTA CTACTGATCG GCTCGCTCGG GGCACAACAG
AGTGTGCCGG GCGCCTATGT AGCAGGCGCC GCGAGCGCTT CGTTGCTGTG GTTTTCCTGC
CTCGCCATCG GCGCGGCCTG GCTCGCTCCC TGGCTGGCCC GCCCTGCCAC ATGGCGTCTG
CTGGATGTGA TGGTGGCGGT CATGATGTTC AGTGTGGCGT GGCAATTGAT CCGTTCGGCC
TGA
|
|---|
| Protein sequence | MWQSYFNGLL IAAGLIMAIG SQNAFVLAQG LRREHHVSVA MLCIICDAIL VAAGVFGLAN
VLAQNPTLLA VARWGGVLFL SWYGVQALRR ACSKQSLEHG AAAGKRSRRT VLLSALAVTL
LNPHVYLDTV LLIGSLGAQQ SVPGAYVAGA ASASLLWFSC LAIGAAWLAP WLARPATWRL
LDVMVAVMMF SVAWQLIRSA
|
|---|
| |