Gene Psyr_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4047 
Symbol 
ID3369583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4830485 
End bp4831591 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content62% 
IMG OID637654405 
ProductBeta-lactamase 
Protein accessionYP_237115 
Protein GI66047274 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTG GATTTGTCCG CCTGTGTCTG GTTCTGATCC TGGGTTTCAG TGCCCAGGGC 
GTCGTTGCTC AAACATGGCC GACAGAGCAA TGGCCTTCTC GGTCTGTGCC GCGATCTGCG
GCCATCGAAG AGCTTGAGGC CTACGCTTTC CCGCCTCGCG ACGACGCCAC GCGCAAGGGC
GTACGCACCG ATGCGCTGCT GGTGATTCGT GATGGCGACG TTGTGTACGA GCGCTATGCC
GGTGTGACCA CCGCGCAAAC GCCGCACCTG ACCTGGTCGA TCAGCAAAAG CATCATGGCG
ACGGTGTTGG GGGTGGCGTT CGCAGAAGGG CGCTTTCAAC TGAATGACCC GGTGGCGAAG
TTCTACACGC CGTTCAAGGC GCACCCCGAT ATCGCCATCA AAGACCTGAT GCACTGGGCT
TCGGGTCTGG ATTGGCAGGA AGACTACGAA TACGCTCCGT TCAACTCCTC GGTGGTTGCC
ATGCTCTACA CCCGCGGGCG TGACGACATG GCGCGTTTCA CTGCCGATCA CAGCGCTGCC
CAGCACCCTG GCGAGACTTA CCTTTATTCC AGCGGCGACA GCACCGTGCT GGCGGCGGCC
TTGAAAAAGA TGGTCGGCGA TGAGGCTTAT CCGGGTTATC CATGGACCGC GCTGTTCGAC
CCGCTCGGCA TCCGCAGTGC GGTCTGGGAA ACCGATGGCG CGGGTACATT TGTAGGTTCG
TCCTATGCCT ACATGACCGC CCGCGATCTG GCCCGCATCG GCCTGCTGAT GCAGCGCGGC
GGGCAATGGC AGGATCGGCA GTTGCTCAAC AAGCAGTGGA TGGACTTCGT GCTGACGCCG
TTTGCCGGTG CAGGCGTGGA TGCCAGCGTT GAAGTGCCCG CAGGTCAATG GTGGCTTAAC
CGTACTGGCG ATGGCGGCAA AGGACCGTGG CCGGACGCTC CCCCCGACAC CTTCGCGGCA
CTGGGGCATT GGGGGCAGGC GCTGTATGTG ATTCCCGATC AGAAGCTGGT GATCGTGCGC
TATGCCGATG ACCGCGACAG TACCTACAAC CACAATGAGA TGCTCAAGCG CGTACAGGCC
GCGTTCGGCA AGGAGGGCGG TCAATGA
 
Protein sequence
MPRGFVRLCL VLILGFSAQG VVAQTWPTEQ WPSRSVPRSA AIEELEAYAF PPRDDATRKG 
VRTDALLVIR DGDVVYERYA GVTTAQTPHL TWSISKSIMA TVLGVAFAEG RFQLNDPVAK
FYTPFKAHPD IAIKDLMHWA SGLDWQEDYE YAPFNSSVVA MLYTRGRDDM ARFTADHSAA
QHPGETYLYS SGDSTVLAAA LKKMVGDEAY PGYPWTALFD PLGIRSAVWE TDGAGTFVGS
SYAYMTARDL ARIGLLMQRG GQWQDRQLLN KQWMDFVLTP FAGAGVDASV EVPAGQWWLN
RTGDGGKGPW PDAPPDTFAA LGHWGQALYV IPDQKLVIVR YADDRDSTYN HNEMLKRVQA
AFGKEGGQ