Gene Psyr_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4029 
Symbol 
ID3369565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4796791 
End bp4798242 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content62% 
IMG OID637654387 
Productpyruvate kinase 
Protein accessionYP_237097 
Protein GI66047256 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0169021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC GCCGCACCAA AATCGTCGCC ACACTTGGCC CTGCCAGCAA CTCGCCGGAA 
GTCATCGAAC AACTGATCCT TTCGGGTCTG GACGTTGCTC GTCTGAACTT CTCTCACGGT
ACTCCGGACG AGCACAAGGC TCGCGCCAGG CTGATCCGCG AAATCGCCGC CAGACACGGG
CGCTTCGTCG CTCTGCTGGG CGACCTGCAG GGTCCGAAGA TTCGTATCGC AAAGTTCACC
GACAAGCGAA TAGAGCTGAA GGTCGGTGAC AAGTTCACCT TCTCCACTGC TCATCCGCTG
ACCAGTGGCA ACCAGCAGAT CGTGGGTATC GATTACCCGG ATCTGGTCAA GGATTGCGGC
GTAGGCGACG AGTTGCTGCT CGACGATGGT CGCGTGGTCA TGCGCGTCGA CACCCAGACC
GCTGACGAAC TGCACTGCAC CGTGCTGATC GGTGGTCCGC TGTCCGACCA CAAAGGCATC
AACCGTCGTG GTGGTGGCCT GACGGCGCCA GCACTGACCG AAAAAGACAA GCAGGACATC
AAGCTCGCTG CCGAGATGGA CCTGGACTAC CTGGCCGTTT CCTTCCCGCG CGACGCCGCC
GACATGGAAT ACGCCCGCCA GTTGCGCGAC GAATCCGGTG GTACGGCCTG GCTGGTGGCC
AAGATCGAAC GTGCCGAAGC CGTTGCCAAC GACGAAGTGC TGGATGAGCT GATCCGCGCC
AGTGACGCGG TCATGGTCGC TCGTGGTGAC CTGGGTGTCG AAATCGGTGA TGCCGAACTG
GTCGGCGTAC AGAAACGCAT CATCCTGCAC GCCCGTCGCC ACAACAAGGC GGTGATCGTC
GCCACGCAGA TGATGGAGTC GATGATCTCC AGCCCCATGC CGACGCGTGC CGAAGTGTCC
GACGTGGCCA ACGCCGTGCT CGACTACACC GACGCCGTGA TGCTGTCGGC CGAAAGTGCT
GCAGGCTCCT ACCCGATCGA AGCGGTTCAG GCCATGGCCC GTATCTGCAT CGGTGCTGAA
AAGCACCCGA CCGGCAAGAC GTCCAGCCAC CGCATCGGTC ACTCGTTCAC CCGTTGTGAC
GAAAGCATCG CGCTGGCGGC CATGTACACC GCCAACCACT TCCCGGGTGT GAAGGCGATC
ATCGCACTGA CCGAAAGCGG CTACACCCCG CTGATCATGT CGCGCATCCG CTCCTCGGTG
CCGATCTACG CGTTCTCTCC GCACCGTGGT ACTCAGGCGC GTGCTGCGAT GTTCCGTGGC
GTCTACACCG TGCCATTCGA CCCGGCAGCG CTGCCGCCAG GTCAGGTCAG CCAGGCCGCA
GTCGACGAAC TGCTCAAGCG TGGTCTGGTC GAGCAAGGTG ACTGGGTCAT CCTCACCAAG
GGCGACAGCT ACCACACCAT CGGCGGCACC AACGGCATGA AGATTCTGCA CGTCGGCGAC
CCGTTGGTCT GA
 
Protein sequence
MTVRRTKIVA TLGPASNSPE VIEQLILSGL DVARLNFSHG TPDEHKARAR LIREIAARHG 
RFVALLGDLQ GPKIRIAKFT DKRIELKVGD KFTFSTAHPL TSGNQQIVGI DYPDLVKDCG
VGDELLLDDG RVVMRVDTQT ADELHCTVLI GGPLSDHKGI NRRGGGLTAP ALTEKDKQDI
KLAAEMDLDY LAVSFPRDAA DMEYARQLRD ESGGTAWLVA KIERAEAVAN DEVLDELIRA
SDAVMVARGD LGVEIGDAEL VGVQKRIILH ARRHNKAVIV ATQMMESMIS SPMPTRAEVS
DVANAVLDYT DAVMLSAESA AGSYPIEAVQ AMARICIGAE KHPTGKTSSH RIGHSFTRCD
ESIALAAMYT ANHFPGVKAI IALTESGYTP LIMSRIRSSV PIYAFSPHRG TQARAAMFRG
VYTVPFDPAA LPPGQVSQAA VDELLKRGLV EQGDWVILTK GDSYHTIGGT NGMKILHVGD
PLV