| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3999 |
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| Symbol | |
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| ID | 3369535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4763337 |
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| End bp | 4764662 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654357 |
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| Product | major facilitator transporter |
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| Protein accession | YP_237067 |
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| Protein GI | 66047226 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.321755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.07959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACTT CCAATCCCGC CTCCCATGGG TCGGCTGCTA CTGCCGCTGG CCAGAAAACC
ACCTCCAGCC GTCTCAAATC GATTTTCAGT GGCTCGGTCG GCAACATGGT CGAGTGGTAC
GACTGGTACG TCTACGCCGC CTTCTCGCTG TACTTCGCCA AAGCCTTCTT TCCCAAGGGC
GACACCACCG CCCAGTTGCT CAACACCGCT GCGATCTTTG CCGTCGGCTT TCTGATGCGG
CCTATCGGTG GCTGGCTGAT GGGGCTTTAC GCTGACTACA AAGGCCGCAA GGCTGCACTG
ATGGCCTCGG TGCTGCTGAT GTGCTTCGGC TCGCTGATCA TTGCCCTGAC GCCAGGCTAT
GAAAGCATCG GCGTCGGTGC TCCGATCCTG CTGGTGTTTG CCCGCTTGCT GCAGGGCCTG
TCTGTCGGCG GTGAATACGG CACGTCCGCC ACCTACCTCA GCGAAATGGC CACCAAGGAG
CGTCGCGGCT TCTTCTCCAG CTTTCAGTAC GTCACGCTGA TTTCCGGCCA GCTCATCGCG
CTGGGCGTGC TGATCGTTCT GCAACAGACG CTGACCACCG AGCAGCTCTA TGCCTGGGGC
TGGCGTATCC CGTTCGTCAT CGGTGCCCTG TGCGCAATCG TCGCGCTGTT CCTGCGTCGC
GGCATGGAAG AAACCGAGTC GTTCACGCGC AAGAAGAAGG AAAAGCCCAA GGAAAGCCTG
ATGCGCACGC TGATGCGTCA TCCCAAGGAA CTGATGACCG TCGTGGGTCT GACCATGGGC
GGGACGCTGG CTTTCTACAC TTACACCACT TATATGCAGA AGTATCTGGT CAACACCGTC
GGCATGAGCA TCACCGACTC GACGTCGATA TCAGCGGCGA CACTGTTTCT GTTCATGCTG
TTGCAGCCGG TCGTTGGTGC GCTGTCCGAC AAGATCGGGC GTCGTCCGAT CCTGATTGCG
TTCGGCGTAC TGGGAACGCT GTGTACCGTA CCGATCCTGA CCACGCTGCA TACCATTCAG
ACATGGTGGG GTGCGTTCTT CCTGATCATG GCGGCATTGA TCATTGTCAG CGGCTATACC
TCGATCAACG CAGTGGTGAA GGCCGAGCTG TTTCCGACCG AGATCCGTGC GCTGGGCGTC
GGTCTGCCTT ACGCCCTGAC GGTATCGATC TTCGGCGGCA CTGCGGAATA CATCGCGCTG
TGGTTCAAGA GCATCGGGAT GGAAACCGGT TACTACTGGT ACGTCACTGC CTGTATTGCC
TGCTCGCTGC TGGTGTATGT GTTCATGAAA GACACCCGCA AACACTCGCG TATCGAAACT
GACTGA
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| Protein sequence | METSNPASHG SAATAAGQKT TSSRLKSIFS GSVGNMVEWY DWYVYAAFSL YFAKAFFPKG
DTTAQLLNTA AIFAVGFLMR PIGGWLMGLY ADYKGRKAAL MASVLLMCFG SLIIALTPGY
ESIGVGAPIL LVFARLLQGL SVGGEYGTSA TYLSEMATKE RRGFFSSFQY VTLISGQLIA
LGVLIVLQQT LTTEQLYAWG WRIPFVIGAL CAIVALFLRR GMEETESFTR KKKEKPKESL
MRTLMRHPKE LMTVVGLTMG GTLAFYTYTT YMQKYLVNTV GMSITDSTSI SAATLFLFML
LQPVVGALSD KIGRRPILIA FGVLGTLCTV PILTTLHTIQ TWWGAFFLIM AALIIVSGYT
SINAVVKAEL FPTEIRALGV GLPYALTVSI FGGTAEYIAL WFKSIGMETG YYWYVTACIA
CSLLVYVFMK DTRKHSRIET D
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