Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3991 |
Symbol | |
ID | 3369527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4749978 |
End bp | 4750595 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654349 |
Product | hypothetical protein |
Protein accession | YP_237059 |
Protein GI | 66047218 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.296881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.226333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTAC TGAACAAAGA CGAACAGCGG CAGGTTGCCG AAGCGATTGA CCGCGTCGAG CAGCGCACTG ACGCCGAGCT GGTCACGGTA CTGGCCGCTC GCGCTGACGA CTATGCCTAC ATGCCGTTGA TCTGGGCCGG GCTGATCGGC CTGCTGCTGC CGGGCACGAT CAACTACTGC CTTCAATGGT TGAGCGCGGA CGAGTTGATG CTCGCGCAGA TGAGTACGTT CATTATTGTC GCGCTGGTGT GTCGCCTGTC GAAGGTCTCC GCGTTGCTGG TGCCGCTTTC GGTGCGGCGC TGGCGGGCCG GGAATCTCGC GCGTCGGCAG TTTCTCGAGC AGAACCTGCA CAAGACCCAC GACGGAACCG GCATTCTGGT GTTTGTCAGC GAGGCCGAAC GGTATGTCGA AATCCTGGTT GACCATGGCA TTGCCAGTCG TCTGCACAAC GACACCTGGA AGGCGATGGT TGACGTGTTT ACCCAGCAGG TCAGAGACGG ACAGACCTTG CAGGGGTTTC TCGGGTGTAT CCATGCCTGT GGCGAGCTGC TTGCCGATCA TGTACCAGTG ACTCACGGCA GGAATGAATT GCCGAATCGG CTGGTGGTGC TGGGGTAA
|
Protein sequence | MALLNKDEQR QVAEAIDRVE QRTDAELVTV LAARADDYAY MPLIWAGLIG LLLPGTINYC LQWLSADELM LAQMSTFIIV ALVCRLSKVS ALLVPLSVRR WRAGNLARRQ FLEQNLHKTH DGTGILVFVS EAERYVEILV DHGIASRLHN DTWKAMVDVF TQQVRDGQTL QGFLGCIHAC GELLADHVPV THGRNELPNR LVVLG
|
| |