Gene Psyr_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3988 
Symbol 
ID3369524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4746168 
End bp4747388 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content58% 
IMG OID637654346 
Producthypothetical protein 
Protein accessionYP_237056 
Protein GI66047215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.582259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA TTACCTCCAC GTCACCCATC GCTGCGACCG ATCACCTCGC GCAGTTCCTT 
GGCCTGCTGG ACATCAGCCT GTCGCAGAAC TCGCTGATCA AGCTGGTCCT GGCCAAATAC
GTGGGCAGCG AAGCCGACTT GCAGCGGATC ATCATCAAGC CGCTGACCGT CAAGGAACAA
CCGTGCCTGA GCTTCGTGTA TCGCTACAAG ACTCGTGACA TCACCAAGAA TTTTTCGCTT
GCTGAAGCGG TGGCTGTCAT TGCCAGCCTG ATTCCGGCGT CCTTCAAGAA TGCGCACCTG
TTGTCGCTGA CCGACGAGGT GCAGTTGGAG TTCAGCAAGA AGGGCAAGAC GACGCTGTTC
AAAAGCAAGG CTCAGCAGGA GCGCCAGGCT CCTTCGGCCG GGCATGACCG CGAGAAGAAA
CGCTACCTGG AGCTTACCCG GCCATTCCTG ACTGACTTGG GTGTGACCAA TCGCCAGCAT
GAGCTGATTC CGGCCATGTC GCGCAAATGG AAGCAGATTA ACAAGTTCAT CGAAGTGTTT
TCCCATGCAC TGAGCTCATC GCCGCTCAAG CTCGATCAGC CGATCAAGGT TGCGGACTTC
GGCTCAGGCA AGGGTTATCT GACCTTCGCC ATCCACGACT ACCTGTGCAA CACCTTGCAG
GCGCAAGGGC AGGTGACCGG TGTCGAGCTG CGCGAAGACA TGGTCACGCT GTGCAACGAG
GCGGCGGCGA AGCTCGATCA TCCGGGGCTG ACCTTTGCGC AGGGTGACGT GCGTACAGTG
GCGCCCAGCG CGCTGGACGT GATGATTGCG CTGCACGCCT GTGATATCGC GACAGACTAC
GCCATTCATA TGGGCATTCG CTCCGGCGCC TCGATCATCA TGTGCTCGCC GTGCTGCCAC
AAACAGATCC GCTTGCAGAT CCAGAGCCCG ACGCTGTTGA AACCGATGCT GCAATACGGT
CTGCACATGG GCCAGCAGGC AGAAATGGTC ACCGACAGCC TGCGCGCGCT ATTGCTGGAA
GCATGCGGTT ACGAGACCAA AGTGTTCGAG TTCATCTCGC TGGAGCATAC CAACAAGAAC
AAGATGATCC TCGCGGTCAA GCGTGCCGAG CCGGTCGATC CGGCTCAGTT ACTGGCGCGC
ATTCAAGAGC TCAAAACGTT CTACGGCCTC AGCGAGCATT GCCTGGAAAC GCTGCTCAAG
GGCGACGGCT TTATTGGCTG A
 
Protein sequence
MSVITSTSPI AATDHLAQFL GLLDISLSQN SLIKLVLAKY VGSEADLQRI IIKPLTVKEQ 
PCLSFVYRYK TRDITKNFSL AEAVAVIASL IPASFKNAHL LSLTDEVQLE FSKKGKTTLF
KSKAQQERQA PSAGHDREKK RYLELTRPFL TDLGVTNRQH ELIPAMSRKW KQINKFIEVF
SHALSSSPLK LDQPIKVADF GSGKGYLTFA IHDYLCNTLQ AQGQVTGVEL REDMVTLCNE
AAAKLDHPGL TFAQGDVRTV APSALDVMIA LHACDIATDY AIHMGIRSGA SIIMCSPCCH
KQIRLQIQSP TLLKPMLQYG LHMGQQAEMV TDSLRALLLE ACGYETKVFE FISLEHTNKN
KMILAVKRAE PVDPAQLLAR IQELKTFYGL SEHCLETLLK GDGFIG