| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3985 |
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| Symbol | |
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| ID | 3369521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4743013 |
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| End bp | 4744278 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654343 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_237053 |
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| Protein GI | 66047212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.971043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCC TGCGTTCTCT TTTGCAAAGC GGCTGTCTGA AGATCGCCAC CACTCTGGTT
CTGCTCCTGT CAGGAGCGCA ATGCCTGTGG GCAGCAGACA TGCCTGAAGG TTTCGCCAAG
GGCGTGACCG GCGGAGGCTC CGCGGCTGCC GTGCATCCCT CCACGCGGGA TGAACTTCGA
TCAGCACTCT GCTCGTCGCA TGACTCACAC GGGGCCTGCA CCGATGACAC ACCCCGAGTG
ATTGTCCTGG ACCACACATT CGACTTCCGC GCGAGCGTGA TTACCAACGG CAGTACCACA
ACCACCGAAC CTGGTTGCGT CGTGAAACCG TGCCCGCAGG GTGGTGAGCA ACTTGCACTG
AATGGTGCCA ACGACTTCTG CCAATCAAGG CCGCCCGTCA TGGTGACCTA CGACAACGCG
GGACTGAAAC CACTGAAAGT CGGCTCCAAC AAGACATTGA TCGGGCTTGG CGACAAGGCA
GGCATTCAGG GCGCTGGACT GTTCATTGGC GACGGTGCGC ATAACGTGAT CGTTCGTAAC
CTGACCCTTT CGGATATCAA CCCGCATGTC GTATGGGGCG GCGATGCGCT GACCCTGAAC
AAGGCCGATG GCGTGTGGAT CGATCACAAC ACCTTTGCGC GGATCGGCAG ACAGATGATC
GTGACAGGCT GGGGCACTGC TTCACACGTC ACCATTTCCA GCAATGAATT CGACGGCCGT
ACGCCTTACT CGTCTACCTG CGATGGCCAT CATTATTGGG TCTGGCTGTT CCTCGGCAGT
CAGGACACGC TGACGCTGTC GAGAAACTAC ATACACGACA CCTCCGGCAG AGCACCTCAT
TCCGGCGGGA TGAAAAATGC GCAAATCCGC GCTCAACTGG TCAACAACGT CTTTCAGCGC
ATGACCTACC AAGGCGCAAT CATGTCGCGG ACCTCATCTT CACAGTTGCT GGTAGAGGGA
AACGACTTCG AAAACGTAGC CCACCCACTG TTCAACGATA CGGATCAGCC AGGTACGGCA
TTCGCTTTGT TCGAGCCGGT TTCGACGGCT GCAAACAACG TGTGCATGAG CGTGATCGGC
AGGCCTTGTG TGGCGAATCA GCAACAGGAT AGCGGCGACG ACTATCGCCC GCAGGATGCC
TCTGTCTTGC AGGCGTTTCG CGAGTATCGG CAGTACCTGG TGGCGCCGGT TTCGGCGCAA
GAGGCCAAGG CGCGGGTGCC GGGAGAGGCG GGGGTGGGTA AGGCCAGTGC CGGGCTGCTG
CAATGA
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| Protein sequence | MTPLRSLLQS GCLKIATTLV LLLSGAQCLW AADMPEGFAK GVTGGGSAAA VHPSTRDELR
SALCSSHDSH GACTDDTPRV IVLDHTFDFR ASVITNGSTT TTEPGCVVKP CPQGGEQLAL
NGANDFCQSR PPVMVTYDNA GLKPLKVGSN KTLIGLGDKA GIQGAGLFIG DGAHNVIVRN
LTLSDINPHV VWGGDALTLN KADGVWIDHN TFARIGRQMI VTGWGTASHV TISSNEFDGR
TPYSSTCDGH HYWVWLFLGS QDTLTLSRNY IHDTSGRAPH SGGMKNAQIR AQLVNNVFQR
MTYQGAIMSR TSSSQLLVEG NDFENVAHPL FNDTDQPGTA FALFEPVSTA ANNVCMSVIG
RPCVANQQQD SGDDYRPQDA SVLQAFREYR QYLVAPVSAQ EAKARVPGEA GVGKASAGLL
Q
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