Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3983 |
Symbol | |
ID | 3369519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4736482 |
End bp | 4738839 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637654341 |
Product | serralysin |
Protein accession | YP_237051 |
Protein GI | 66047210 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTCGA TGTGCGATGC ACTTACCCAA CTTTGGGACG AAGGAGCGAC TGGCCAGGGT GCGGCTAAAC AGACAGCCAC CAACCAAGCG GCGCTTGGGC ACCTGACGCT CGACCAACAA GCCTACTACC TTACTGATGG CTATTGGCAC GACGCCTATG GCGGTTCCCA GCACCATTTT GACGTGCACG CCGGAGGGTC GCTCACTGTC AACCTGGCAA GTTTGAGCGC AAGCGCTCAG GTTGTTGCTC GATATGCGCT GCAAACCTGG ACCAATGTCA GCGGCCTAAA CTTTGTGGAA ACCACCGCTG CCGCTGCGAT CAATTTCAGC GAACAAAAAA GCGGTGCGTA CAGCAACTCC AATTATGCAG GCAGCATCAT CTCGGACAGC AGCGTCAACA TCGCTTCCGA TTGGGTGAAA TACGGTTTGT ATTATCAGCA AACCTACATT CATGAAATCG GCCACGCGCT GGGGTTGGGC CATGCGGGCA ATTATAACGG GAGCGCGACC TTCCCCAACA ATGCCTTCTA TCAAGAGGAC AGCTGGAAAT ACTCGGTGAT GTCCTACTTC AGCCAGGACG AGAATACGTA TTCCAGCGCC TCTTTCGGCT ATGTCGCTAC CCCCATGCTC GCGGACATCG TAGCCATCCA GTCACTGTAC GGCACCGCCG TTACCCGCAC AGGTGACAAT ACCTACAGTT TCAACAAGAC TTCCATCAAC ACCGGAACCG ACTTCGTGCC CGGCCTGGTG GCCACGATCT ATGATTCGGG CGGCAACGAC ACGATCAACG TCAGCACCTA TGTCGGCGCT CAGACAGTCG ATCTGAGAAG TGAAGCTTTT TCCAGCCTAT ACGGCGGTCT ATCGAATATT GCAATCGCGC GCGGTACGGT TATCGAAAAC GCCATAACTG GTGCAGGCGC AGATACGCTG ATAGGCAACG CCAGTGACAA CTTTCTAAAT GCAAACGCGG GCAATGACCA GTTGCAAGGC GGCGATGGCA ATGATCGGCT GATGGGTGGG GCGGGCTCGG ACGTGCTCAA TGGTGGCAAC GGCATCGACA CCGCCTTGTA TACCGAGGCA GGTGCTCGCT ACTTTGCAAC CTACGATACC GCGCTGGTGA GGAATGGCAC CCTCAGCGTT CATGATGCGC AAACGTCCGA TGTGGACACA CTTTCAAGCG TCGAAAGGCT GTCTTTCAGC GACCGCAATG CCAATCTTGA CGAACTGCTC ATGGCTTTTC ACAGCCGTTA TGGCGCCTTC AACGCCGAGA GTGACGCCAC TGTTTCGTTG AGTTTTAGCA CCGATCTTCA TCACATCGCG CTCACCGAGG ATCAGGCTGA CATTGCCAGG CTTTATTCAC TGTTCGGTCG GACGCCCGAT TATCAGGGGT TGAATAACTG GCTGACGCAG CAGGCGATCG GCAGTTCGGA TGCAGAGATT CGCGATGGCT TTCTGAATTC CATTGAAGGG ATGCAGCGCT ACAGCGGGCT TGGTGATCGG GACTTTGTCC TTGATCTCTA TCAGACCGTA TTGCATCGCA CAGGCGAAGA ATCAGGTGTG TCGTCCTGGA ACACGCTGTT GCAGGCGGGT GGGAGTCGAG CAGCGGTCGC TGATGGCTTC CTGAATTCGC GCGAGAGCCG TGACCTCTCG GAAGGCGAGA CGGGGTTCAT CAGGATCGTG GCTCATAACG CCTGGAACAA TCTGGATATG GTCGTAGGCA AGGGCGTGGC TACCGGCACG GCTGGGGATG ATCAGATCAG TGAGCAGGAA GTCAGGCTGG ACAGCAATGC GGTTTCGCAT CTGGCGGGCA ACGCTGGTAT CGACACCTTT ATTTTCAACG ACGCTGCATC CGCCTACACG ATCAGCGCGC TTGATACCGA CACGCTATCA GTCAGTCGTT CCACTGGAGC GGCGGCGAAA TTCGAACTGA GTGGGTTCAA TGTGCTCGAT TTCGCAGATC GCGAACTGTT CGTCCTCGAC TCTGCGCAGG CAAGCATTGG TCGTCTGTAT ACCATTCTGG ATCGTGCTCC CGATATTGAA GGCCTGAAGT CCTGGCTGTC TCACGGCGCC GCAGGCGCAA CCGGTGCCCA GGTTGCGGGT GGTTTTGTGC AGTCTGCCGA ATTTTCTCAA AGCCTGCCCA ATGGCAGCAG CAATACAGCC TTTGTCGAAC AGCTGTATCA CAATGTCCTG GACAGAGGCA GCGACGCTAA CGGCCTTGCC TATTGGGTCC AATCGCTGGA CGGCGGCACG AGCCGTGGAC AGGTCGCATT CAATATCGCC AACTCCGCGG AGTCTGCTGC ACTGACTCAA GGCGATGCCG GCTTCATTCA CCTGGTAGGG CATGCTGATT GGGTTTGA
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Protein sequence | MCSMCDALTQ LWDEGATGQG AAKQTATNQA ALGHLTLDQQ AYYLTDGYWH DAYGGSQHHF DVHAGGSLTV NLASLSASAQ VVARYALQTW TNVSGLNFVE TTAAAAINFS EQKSGAYSNS NYAGSIISDS SVNIASDWVK YGLYYQQTYI HEIGHALGLG HAGNYNGSAT FPNNAFYQED SWKYSVMSYF SQDENTYSSA SFGYVATPML ADIVAIQSLY GTAVTRTGDN TYSFNKTSIN TGTDFVPGLV ATIYDSGGND TINVSTYVGA QTVDLRSEAF SSLYGGLSNI AIARGTVIEN AITGAGADTL IGNASDNFLN ANAGNDQLQG GDGNDRLMGG AGSDVLNGGN GIDTALYTEA GARYFATYDT ALVRNGTLSV HDAQTSDVDT LSSVERLSFS DRNANLDELL MAFHSRYGAF NAESDATVSL SFSTDLHHIA LTEDQADIAR LYSLFGRTPD YQGLNNWLTQ QAIGSSDAEI RDGFLNSIEG MQRYSGLGDR DFVLDLYQTV LHRTGEESGV SSWNTLLQAG GSRAAVADGF LNSRESRDLS EGETGFIRIV AHNAWNNLDM VVGKGVATGT AGDDQISEQE VRLDSNAVSH LAGNAGIDTF IFNDAASAYT ISALDTDTLS VSRSTGAAAK FELSGFNVLD FADRELFVLD SAQASIGRLY TILDRAPDIE GLKSWLSHGA AGATGAQVAG GFVQSAEFSQ SLPNGSSNTA FVEQLYHNVL DRGSDANGLA YWVQSLDGGT SRGQVAFNIA NSAESAALTQ GDAGFIHLVG HADWV
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