Gene Psyr_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3982 
Symbol 
ID3369517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4735007 
End bp4735888 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID637654339 
Product3-hydroxyacyl-CoA-acyl carrier protein transferase 
Protein accessionYP_237050 
Protein GI66047209 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCAG AAAAAGCAGT GCTCGACATT CAAGGACAGT TTCGGGTTTA TACCGAGCTC 
TACCGCACCG ATGCCGCCGC CAAGACCATC ATTCTGGTCA ACGGCTCGCT GGCCACTACC
GCATCATTTG CCCAGACCGT CCGCAGCCTT CATCCGGCCT TCAACGTGGT GCTTTACGAT
CAGCCCTATT CAGGCAAATC CAAACCGCAC AACCTGCATG GCGCGCCACT GACCCGGGAA
GAGGAAGGCC AGTTGCTGCT GGAACTGATC GATCACTTCA ACGCCGAGCA CGTGCTGTCC
TTCTCATGGG GCGGCGCAGC GACGCTGGTT GCCCTGGCGC ATCGGCCAAA ACGCATCGAA
AGCGCAGTCA TCAGCTCGTT CTCCCCAGTG ATCAACGAGA AGATGCATGA CTACCTGTGT
CACGGCATCA CGCACCTGGG CGCGCACAAC CGTTATGACA TGGGCCACTT GATCAACAAC
ACCGTCGGCA AGCATCTGCC TACGTTGTTC AAGCGCTTCA ATTTCCGTCA TATCAGCAGC
CTGGATGCTC ACGAGTATGA CCAGATGCAT TACCACTTCA GCCAGGTTCT GGAGCTCGAC
CCGGACAATT ACCTGACCGC AGGCAAGAAC ATCACCGCCC CCGTACTGTT CATCAACGGT
GCCCTGGATG AATACACCTG CGCGCACGAC GCAGCGCAGT TCTCCCGGTA CCTGCACGAT
TGCAGCTTCA GCACCATCGA CGCCACCGGC CACTTTCTGG ACATGGAACA CAAGGCCGCC
TGCCGCGACT CGAAACAGGT GCTCATGAAC TTCCTGCAAC CGGCACAGGT GTCACGCGAC
GGCCATAACC GGGTTCAGGA CTATCCGTCC CTGACCTTCT GA
 
Protein sequence
MSPEKAVLDI QGQFRVYTEL YRTDAAAKTI ILVNGSLATT ASFAQTVRSL HPAFNVVLYD 
QPYSGKSKPH NLHGAPLTRE EEGQLLLELI DHFNAEHVLS FSWGGAATLV ALAHRPKRIE
SAVISSFSPV INEKMHDYLC HGITHLGAHN RYDMGHLINN TVGKHLPTLF KRFNFRHISS
LDAHEYDQMH YHFSQVLELD PDNYLTAGKN ITAPVLFING ALDEYTCAHD AAQFSRYLHD
CSFSTIDATG HFLDMEHKAA CRDSKQVLMN FLQPAQVSRD GHNRVQDYPS LTF