Gene Psyr_3979 details

Gene Information

• Locus tag: Psyr_3979
• ID: 3369514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 4730539
• End bp: 4733874
• Gene Length: 3336 bp
• Protein Length: 1111 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637654336
• Product: hypothetical protein
• Protein accession: YP_237047
• Protein GI: 66047206

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATCCCA TCTGGAGTCC GCTTCGCCAG GACACGCTGT TTCACCCATC CTCATTGCTG 
CTGGAACAAA CCAGCGTTCT GCGCCCCGAG CACAGCAGTA GCAGACACGA CACGCTGAAC 
GCATCGATAC CGTTTACCCT GGCGGACGGC TTTTCAATGC CCGAACCAAC GCCGTTGCCT 
GCGGTAGCGG AAGAAAGCGA TCCGGAAGAC GCCGCGCCAC ACATCGAACG TCAGCTCAGG 
GCCATGCGTA ACAGTGCAGG CTTCCGGCTG ATTGCCGACT CGCCATTGCT CCTGCAAGCC 
TGCCAACTGG ACATGGACTT TCCGCCGACC CGACAGGATT ACGTTCGCCA GCACCTGACC 
GCGCTGCTCA GACAGAAAAG CGGCAAGGCA CTCGACCCGG ACGTCCTGCA GATCACCTTC 
AGCAACAATG ACCGACCTGC TGTGGATGAC AATGGACACG AGCATTACAG AGTCAGCCTG 
TCGCTGACCG ATGTGGCGCT GGCCAGCTTC GAGCCTGCGC ACTTCCAGGC GCTGTCGCGT 
AGCACCCTTG CCGATCTTTC ACTGTGCGAA AACACGCCTG TGCTGACAAC CGCGCAGATG 
TTCAAGCTGA TTGGCGAGCT GCCGCTCAAA CGCAATTACC ACGCCGTACT GCAGGCTTTC 
AGAGCCCGAC ACGAGGCGAC CTGGCGCACA TTGTCGCGGC TGGCGTTCCT TGACAACCTG 
GCTCGGCAGC TCAATCACAG GCACATCAGC CGGGACGGCT ATTGGCTGGC GCTGGACGCC 
ATGGGACTTG ACCGGTCTCC CATCGACACC GACACGATCA GCATGAGTGG ACGAGGGGAA 
AAATCCGAGG TCCGGATCCT GACCCTGAAT GGCAAACGGG TGCCGGAAAT ATTTCAGATC 
AGCTCGAAAA CCACCTCGCA CTGTTTCATT CACATCCTGG GTGCCAAGGG CAACGTCGTC 
GAATACATCA GCGATGATCC ACGGCAAATG AGCAGACGCC TGTTGGCGGC GATGAACGCC 
TCGGGGCTCT ACGGCCAGGT ATTTCTTTCG CTTGAGCAGC ATGCAGGCAT CGTTGCCGAG 
GCGCCGCTGA TCGAAGGCGA CCTGTTCACC GCACTGACCC AGGCCTGGTT CGCCGGGCTT 
CTAGCCGACA GCCACGCGCG CAGCACGCTC GACCTGCTCA GACCGGTAGC GCGCAGTCTG 
GCGCTGGCTG GTGCAGCAGA CCTGTGGCAG GTACAGCCAG GCATTCTGGA GCAGATCCCG 
GCTGCATCGA AAATGGCCGG CCAGGTCATG GCGAGCTATC TACAGGAAAA CCACGCGCTG 
GCGCTCAACC CCGAACAGGT ATTCATCGCT TATCAACCCG GCTATTCGAG CAACCCCCTG 
GGCAACCCCA GATTGCCGCC TACGTATATT CACACGCCCG ACCCGAGGCC GATCAGCCTG 
AGCGAGGCGC TGATAAGCAA TTATCGAGTC GATCACCCAG CTGGCTACAT CGACCACGGC 
GGCGGCACCA TCGTCTTCCT CGACCCCACC GGGCAGGGCG ACAGTGAGCA GGGTCAGTTG 
CTGGAGATCA GTCCGCAGGC GCTCGAGGAT TACATCAGAG CCTTCGACTT TCTGACCTGG 
ATGACCCAGC GCGTCCACGA CTTCTGGGAC CAGCGGAGAA CCGCCATCGA ACAGGCGTTC 
AGAACCACGT TCATCAGCCA GGCACTGATC AGCCTCAAGC GCGGCAGCCT CACGCGCAGC 
ACCTTCGATC TGCTCGTGGA AACCCTTGCG CCCTCGGCGC CTGATCAATG GCGGTCACTC 
GGTTTTTTCG TCCAGGGCGC GTTGATCGAC GGCATGCAAC AACAGTACAC CGGCCTGCTG 
GTTCTTGAGC AACCGGGCTC ACCGAACGTG CTTTATCAGG CGGGCCACGC CGATGCGTTC 
ATCGAGTTTG CAGATGACAC GGCGCTGAAG CTGCATCTGA ACCGGGCAAC GGCCAATCCG 
GAATGGCGTG AGGCGGTCAT GCGGTATGTT CCCCGCCGTC ATCACCAGCG CCTGGACTAC 
CTGCTCAAAT TATGGGGCGG GACACAGGCG CCCAACCCAC CCGTTTCCAT CCTTCGCCCC 
TGGACCGATG CGCTGTACAA CCCTGACACG CGACAGGCCA TGAGCCACTC GTTGTGTGAA 
AAAAGGCTGG AAGACACGCC ATTCGCTTTT CTACACCAAC TGCTCAAACA GAACGCGCGG 
GATGACGCAG AGGATCAGAT CGTCACGTCA ACGCAGGTAA CCCTGGCGGA CTGGACCGAC 
CGGCTGCAGC AATTACAGCG GCTGCTGGTG CCTATGTCCT TGTTGCTGAC ACCTGCGCTC 
GTTGCCTCCC TGGCGACGGA AATTGGCATC ACCTCGCTGG CCATTGCCGC AACCCATCTG 
CCGGGCAGCC GTTACGCAGA GAAAAACCAG GCGTTGCTGG CTACGCTAAC GCTGGGCTTG 
CTGCAACTGG CTCCGCACAC GCCAAGGCTG CTGCGCTCAC TGAGCCGAAT CGTCAAACCT 
GCCGTGCGTA ACCGCCAAAC CACCGCGATT ACACTCAACC GGGCGCTCGG CACCCGGCCG 
TTGCGCAGGC AATTCGTCAC GCCGCGCCAG ACCCGGCTGG AGAAATTCTT TCACACCGAC 
GCCCTGCTCA AGCGCTGGAC GGTCAGCACT GCCGTCTCGT CAAACCTGTT GCAGGTCCAT 
GCCTGGAAGC TGGGTAAAAG GTTCCTGTTA TGGACGTCCG ACAGAGGTCA GGCGCGCACT 
CTGGTGGTCA GTAGCCACGG GTACTACACG CCGTGGTCTC GAACGGTGAA AATCCCCAAC 
GGTACCGAGA TTCGCACCTA CGCGCCGCAT GGCTACGAAC TGGTGGACCC GAAGCTGCAT 
CGGGTCGTCA ATAAGAACGC CCGGCCATTC GCCCGTTCCA ACACGGCGGT GCACAGCGTG 
ATGCAGCCCA CACCGCTTGA ACCACTGCTT CTCACCGACA AGTTGATAGC AGGCACTTCG 
CTGCCCGGCA GGCTGAAGAA CTACAGCCTG TCCAAGTTTC AGACGACGAC CAGCGAGACC 
TATGACGAGA TCGCAAGCGT GGTGGGCAAT TCGCGCGCCT CGCCCCTGCG CGGCTGGTTG 
CCGCCGACGC CGATGGATGT TCTGACAGTG CGCAACCGCT TCGGCATGCC CCCGCCATCG 
CTGGCCGACC TGTTCGAAAG CCTGTCCATT CAAGGCATCC ATTACGACAG AATATTGCTG 
GTGCACTGCC GGTGTGCGGC GATATCGGCG CTGATGAACC GCTCACCCGT CTATCATGCC 
CCGACAGCGA GCTCGGTGAT TGCTAATATG GCCTGA 

 

Protein sequence

MNPIWSPLRQ DTLFHPSSLL LEQTSVLRPE HSSSRHDTLN ASIPFTLADG FSMPEPTPLP 
AVAEESDPED AAPHIERQLR AMRNSAGFRL IADSPLLLQA CQLDMDFPPT RQDYVRQHLT 
ALLRQKSGKA LDPDVLQITF SNNDRPAVDD NGHEHYRVSL SLTDVALASF EPAHFQALSR 
STLADLSLCE NTPVLTTAQM FKLIGELPLK RNYHAVLQAF RARHEATWRT LSRLAFLDNL 
ARQLNHRHIS RDGYWLALDA MGLDRSPIDT DTISMSGRGE KSEVRILTLN GKRVPEIFQI 
SSKTTSHCFI HILGAKGNVV EYISDDPRQM SRRLLAAMNA SGLYGQVFLS LEQHAGIVAE 
APLIEGDLFT ALTQAWFAGL LADSHARSTL DLLRPVARSL ALAGAADLWQ VQPGILEQIP 
AASKMAGQVM ASYLQENHAL ALNPEQVFIA YQPGYSSNPL GNPRLPPTYI HTPDPRPISL 
SEALISNYRV DHPAGYIDHG GGTIVFLDPT GQGDSEQGQL LEISPQALED YIRAFDFLTW 
MTQRVHDFWD QRRTAIEQAF RTTFISQALI SLKRGSLTRS TFDLLVETLA PSAPDQWRSL 
GFFVQGALID GMQQQYTGLL VLEQPGSPNV LYQAGHADAF IEFADDTALK LHLNRATANP 
EWREAVMRYV PRRHHQRLDY LLKLWGGTQA PNPPVSILRP WTDALYNPDT RQAMSHSLCE 
KRLEDTPFAF LHQLLKQNAR DDAEDQIVTS TQVTLADWTD RLQQLQRLLV PMSLLLTPAL 
VASLATEIGI TSLAIAATHL PGSRYAEKNQ ALLATLTLGL LQLAPHTPRL LRSLSRIVKP 
AVRNRQTTAI TLNRALGTRP LRRQFVTPRQ TRLEKFFHTD ALLKRWTVST AVSSNLLQVH 
AWKLGKRFLL WTSDRGQART LVVSSHGYYT PWSRTVKIPN GTEIRTYAPH GYELVDPKLH 
RVVNKNARPF ARSNTAVHSV MQPTPLEPLL LTDKLIAGTS LPGRLKNYSL SKFQTTTSET 
YDEIASVVGN SRASPLRGWL PPTPMDVLTV RNRFGMPPPS LADLFESLSI QGIHYDRILL 
VHCRCAAISA LMNRSPVYHA PTASSVIANM A