Gene Psyr_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3968 
Symbol 
ID3369503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4715438 
End bp4716952 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content63% 
IMG OID637654325 
Producthypothetical protein 
Protein accessionYP_237036 
Protein GI66047195 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.675721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTT TCGGTTATCT GGGCCAGGGC TTCGGTGTCG CCCTGACGCC TTACAACCTG 
ATCACGGCGC TGTGCGGAAC ATTGATTGGT ACTGTCGTCG GCCTGCTACC GGGGCTTGGA
CCGATCAACG GTGTCGCGCT GCTGATCCCT ATCGCCTTCG CGCTGGGCCT GCCGCCCGAA
TCGGCGCTGA TTCTGCTGGC AGCCGTGTAC CTGGGCTGCG AATACGGCGG ACGCATCAGC
TCGATCCTGC TGAACATTCC GGGTGAAGCG TCCACCGTGA TGACCACCCT GGACGGTTAC
CCGATGGCCC GCCAGGGCCT GGCCGGGGTC GCACTGTCGC TGTCGGCCTG GAGTTCGTTC
ATCGGCGCGT TCATCGCCAC CTGCGGCATG GTGCTGTTCG CGCCGTTGCT CGCCAAATGG
GCGATTGCTT TCGGTCCTGC GGAATACTTC GTGCTGATGG TGTTCGCGAT CGTCTGCCTG
GGCGGAATGG CCGGTGACCG GCCGTTGAAG ACGTTCATTG CCGCGCTGAT CGGGCTGTTC
CTGTCTGCGG TCGGTATCGA TGCCAACAGC GGGGTGTACC GTTTCACGGG CGACAACATA
CACCTCACCG ATGGCATTCA GTTCGTGGTG CTGGTGCTCG GCCTGTTTTC GATCAGCGAA
ATCCTCTTGC TGCTGGAGAA AACCCATCGC GGCCAGGAGG CAGTCAAGGC CACCGGGCGC
ATGATGTTCA ACGTCAAGGA AGCCGCTGCC GTGTTCGTGG TGAATATTCG CTGCGGTCTG
CTGGGGTTCA TCCTTGGCGT ATTGCCTGGC GCCGGTGCGA CGCTGGCCAG CGCGGTCGCT
TACATGACGG AAAAACGCAT CGCCGGCGCT GGCGGCAAGT TCGGCCAGGG CGACATGCGT
GGCCTGGCCG CACCCGAGAC AGCCATCGGC GCGACGGCCT GCGGCGCCCT GGTGCCGATG
CTGACGCTGG GCGTGCCCGG TTCAGGCACC ACAGCGGTGA TGATCGGCGC GTTGTCGCTG
TACAACATCA CGCCCGGCCC GATGCTGTTT CAGCAGCAGC CGGACATCGT CTGGGGCCTG
ATCGCGTCGT TGTTCATCGC CAACATCATG CTGGTGATCC TCAACATCCC GATGATTCGC
ATCTTCACGC GCATCCTTGC CGTGCCGAAC TGGGCGCTGG TGCCGGTGAT TGCGATCATC
ACCGGCATCG GTGTGTATGC AGTGCACGCC ACCACGTTCG ACCTGTTCCT GATGGTCGGC
ATCGGTATCT TCGGTTACAT CCTGCGCAAG CTGGACTTCC CGCTGTCGCC GATCCTGCTC
GGGTTCATCC TTGGTGGCCT GATGGAGCAG AACCTGCGTC GTGCCCTGTC GATCTCCAAC
GGCGAACTGG GGATCCTCTG GTCCAGCCCG ATTACCCTTG GCGTCTGGGT GGTGACCGTG
TTCATGCTGC TGTTCCCGCT GCTGCGCATC TGGCGCAAGC GCGCCAAACA GCAGGCTGCT
GCGACGCATG GCTGA
 
Protein sequence
MDTFGYLGQG FGVALTPYNL ITALCGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE 
SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARQGLAGV ALSLSAWSSF
IGAFIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVCL GGMAGDRPLK TFIAALIGLF
LSAVGIDANS GVYRFTGDNI HLTDGIQFVV LVLGLFSISE ILLLLEKTHR GQEAVKATGR
MMFNVKEAAA VFVVNIRCGL LGFILGVLPG AGATLASAVA YMTEKRIAGA GGKFGQGDMR
GLAAPETAIG ATACGALVPM LTLGVPGSGT TAVMIGALSL YNITPGPMLF QQQPDIVWGL
IASLFIANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TGIGVYAVHA TTFDLFLMVG
IGIFGYILRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWSSP ITLGVWVVTV
FMLLFPLLRI WRKRAKQQAA ATHG