Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3968 |
Symbol | |
ID | 3369503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4715438 |
End bp | 4716952 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654325 |
Product | hypothetical protein |
Protein accession | YP_237036 |
Protein GI | 66047195 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.675721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTT TCGGTTATCT GGGCCAGGGC TTCGGTGTCG CCCTGACGCC TTACAACCTG ATCACGGCGC TGTGCGGAAC ATTGATTGGT ACTGTCGTCG GCCTGCTACC GGGGCTTGGA CCGATCAACG GTGTCGCGCT GCTGATCCCT ATCGCCTTCG CGCTGGGCCT GCCGCCCGAA TCGGCGCTGA TTCTGCTGGC AGCCGTGTAC CTGGGCTGCG AATACGGCGG ACGCATCAGC TCGATCCTGC TGAACATTCC GGGTGAAGCG TCCACCGTGA TGACCACCCT GGACGGTTAC CCGATGGCCC GCCAGGGCCT GGCCGGGGTC GCACTGTCGC TGTCGGCCTG GAGTTCGTTC ATCGGCGCGT TCATCGCCAC CTGCGGCATG GTGCTGTTCG CGCCGTTGCT CGCCAAATGG GCGATTGCTT TCGGTCCTGC GGAATACTTC GTGCTGATGG TGTTCGCGAT CGTCTGCCTG GGCGGAATGG CCGGTGACCG GCCGTTGAAG ACGTTCATTG CCGCGCTGAT CGGGCTGTTC CTGTCTGCGG TCGGTATCGA TGCCAACAGC GGGGTGTACC GTTTCACGGG CGACAACATA CACCTCACCG ATGGCATTCA GTTCGTGGTG CTGGTGCTCG GCCTGTTTTC GATCAGCGAA ATCCTCTTGC TGCTGGAGAA AACCCATCGC GGCCAGGAGG CAGTCAAGGC CACCGGGCGC ATGATGTTCA ACGTCAAGGA AGCCGCTGCC GTGTTCGTGG TGAATATTCG CTGCGGTCTG CTGGGGTTCA TCCTTGGCGT ATTGCCTGGC GCCGGTGCGA CGCTGGCCAG CGCGGTCGCT TACATGACGG AAAAACGCAT CGCCGGCGCT GGCGGCAAGT TCGGCCAGGG CGACATGCGT GGCCTGGCCG CACCCGAGAC AGCCATCGGC GCGACGGCCT GCGGCGCCCT GGTGCCGATG CTGACGCTGG GCGTGCCCGG TTCAGGCACC ACAGCGGTGA TGATCGGCGC GTTGTCGCTG TACAACATCA CGCCCGGCCC GATGCTGTTT CAGCAGCAGC CGGACATCGT CTGGGGCCTG ATCGCGTCGT TGTTCATCGC CAACATCATG CTGGTGATCC TCAACATCCC GATGATTCGC ATCTTCACGC GCATCCTTGC CGTGCCGAAC TGGGCGCTGG TGCCGGTGAT TGCGATCATC ACCGGCATCG GTGTGTATGC AGTGCACGCC ACCACGTTCG ACCTGTTCCT GATGGTCGGC ATCGGTATCT TCGGTTACAT CCTGCGCAAG CTGGACTTCC CGCTGTCGCC GATCCTGCTC GGGTTCATCC TTGGTGGCCT GATGGAGCAG AACCTGCGTC GTGCCCTGTC GATCTCCAAC GGCGAACTGG GGATCCTCTG GTCCAGCCCG ATTACCCTTG GCGTCTGGGT GGTGACCGTG TTCATGCTGC TGTTCCCGCT GCTGCGCATC TGGCGCAAGC GCGCCAAACA GCAGGCTGCT GCGACGCATG GCTGA
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Protein sequence | MDTFGYLGQG FGVALTPYNL ITALCGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARQGLAGV ALSLSAWSSF IGAFIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVCL GGMAGDRPLK TFIAALIGLF LSAVGIDANS GVYRFTGDNI HLTDGIQFVV LVLGLFSISE ILLLLEKTHR GQEAVKATGR MMFNVKEAAA VFVVNIRCGL LGFILGVLPG AGATLASAVA YMTEKRIAGA GGKFGQGDMR GLAAPETAIG ATACGALVPM LTLGVPGSGT TAVMIGALSL YNITPGPMLF QQQPDIVWGL IASLFIANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TGIGVYAVHA TTFDLFLMVG IGIFGYILRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWSSP ITLGVWVVTV FMLLFPLLRI WRKRAKQQAA ATHG
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