Gene Psyr_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3965 
Symbol 
ID3369500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4712797 
End bp4713468 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID637654322 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_237033 
Protein GI66047192 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTC TTCTTGTGGA AGATCATCTG CAATTGGCTG AAAGTGTCGC GCAGGCGCTC 
AAAAGCGCGG GTTTGACCGT TGATGTGCTG CATGATGGCG TGGCTGCCGA CCTGGCGTTG
AACAGCGAGG AATACGCCGT TGCCATTCTC GATGTCGGGT TGCCGCGCAT GGATGGCTTC
GAAGTGCTGG CGCGTCTGCG CGCGCGCAGC AAAAACCTGC CGGTGCTGAT GCTGACGGCG
CGCAGTGACG TCAAGGACCG GGTCCATGGC CTGAATCTGG GCGCCGACGA CTACCTGGCC
AAGCCTTTTG AACTCTCCGA GCTGGAAGCC AGGGTCAAGG CCTTGCTGCG GCGCAGTGTG
CTGGGTGGCG AGCGGCAACA GTGTTGCGGC GTGCTGGCCT ACGATCTGGA TACGCGACGT
TTCACGCTTG GTGAAGAACT GCTGACCCTG ACCTCTCGCG AACAGGCGGT GCTGGAAGCG
CTTATCGCCC GGCCGGGTCG GGTGATGAGC AAGGAGCAAC TGGCGGCGCA GGTGTTCGGG
CTCGATGAAG AAGCCAGCCC CGACGCCATC GAGATCTATG TCCATCGTCT GCGGAAAAAG
CTCGACGGGC ATTCCGTGGC CATCGTGACC TTTCGCGGTC TGGGGTATCT GCTGGAAAGC
CGTGATGATT AA
 
Protein sequence
MRVLLVEDHL QLAESVAQAL KSAGLTVDVL HDGVAADLAL NSEEYAVAIL DVGLPRMDGF 
EVLARLRARS KNLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELSELEA RVKALLRRSV
LGGERQQCCG VLAYDLDTRR FTLGEELLTL TSREQAVLEA LIARPGRVMS KEQLAAQVFG
LDEEASPDAI EIYVHRLRKK LDGHSVAIVT FRGLGYLLES RDD