Gene Psyr_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3964 
Symbol 
ID3369499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4711422 
End bp4712804 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content64% 
IMG OID637654321 
Productsensor histidine kinase 
Protein accessionYP_237032 
Protein GI66047191 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACG ACAGCCTGCG CTGGCGGTTG TTGTGGAACC TGGCCTTGCT GCTGGTGGTG 
TTGATGCTGG CCAGCGGCAT GAGCGCTTAC TGGAATGGCC GCGAAGTGGC CGACACCGCC
TATGACCGCA CATTGCTGGC TTCCGCGCGG ACCATCGCTG CCGGCCTGAC CCAGCGTGAT
GGGACGCTGA GCGCCGACAT CCCCTACGTG GCGCTGGATA CCTTCGCCTA CGACAGCGAA
GGGCGCATCT ACTATCAGGT CAATGACATT CATCAGAAGC TGATTTCCGG CTATGAAAAC
CTGCCTTCGC CGCCGCCCGG TACCTTGCGT ACCGACGATT ACCCGGCCCT GGCGAAATTT
TATAACGGAA CCTATCAGGG GCAGGATGTG CGTGTCGTCA GCCTGCTCAA GCCGGTGACC
GACCCGGGCA TGAACGGTAC CGCTGAAATC CGCGTTGCCG AAACCCAGGA AGCGCGCAAG
GGCATGGCGC GCAGCCTGAT GGCCGACACA TTGCTGCGCC TGGGCATGCT CGGAGGGGGC
GCGCTGCTGC TGGTCTGGTT CACGGTAAGC GCGGCATTGC GACCGCTGGA GCGGCTGCGT
ACTGCCGTCG AGGAGCGTCA GCCGGATGAT CTGCGCGCGT TGCCGATGGT TGAGGTGCAG
CACGAACTGC GTCCGTTGGT GGGCGCGCTG AACCACTTTA CCGAGCGACT GCGCGTGCAA
TTCGAGCGTC AGGCGCAATT CATTGCCGAT GCCGCCCACG AACTGCGCAC CCCGCTGGCC
GCCTTGAAGG CGCGGGTCGA ACTGGGGCTG CGCGAACGCG ACCCGCAGCA TTGGCGCAGC
ACGCTGGAGT CGGCGGCGCT TGGCACCGAT CGACTCACGC ATCTGGCTAA CCAGTTGCTG
TCCCTGGCGC GCATCGAAAA CGGCGCGCGG GCCATCGCCG AGGGTGGGGC GCAACAGCTG
GACCTCAGTC AACTGGCCAG GGAGCTGGGC ATGGCCATGG CGCCGTTGGC TCATTCCCGG
GGCGTGGCGC TGGCGCTGGA GGCTGACGAG CCGGTCTGGC TGCGCGGCGA GCCGACCTTG
CTGAACGAGT TACTGAGCAA TCTGATCGAC AACGCGCTGG CCCACACTTC ACCGGGCGGC
AACGTGGTGT TGCGGGTCTA TGCGCCGGGT GTTCTAGAGG TGGAGGATGA TGGCCCCGGC
ATTCCGCCTG ATGAACGTGA GCGCGTGTTC GAGCGTTTTT ACCGTCGCAG CCAGCAGGGC
AGTGGTGCCG GGCTCGGGCT GGCGATTGTG GGTGAAATCT GCCGGGCACA TCTGGCCAGA
ATCACCTTGC ACGAGGGCGC CGAGCGCGGC TTGAAGGTAA GGGTCAGTTT CAGCGCCACC
TGA
 
Protein sequence
MINDSLRWRL LWNLALLLVV LMLASGMSAY WNGREVADTA YDRTLLASAR TIAAGLTQRD 
GTLSADIPYV ALDTFAYDSE GRIYYQVNDI HQKLISGYEN LPSPPPGTLR TDDYPALAKF
YNGTYQGQDV RVVSLLKPVT DPGMNGTAEI RVAETQEARK GMARSLMADT LLRLGMLGGG
ALLLVWFTVS AALRPLERLR TAVEERQPDD LRALPMVEVQ HELRPLVGAL NHFTERLRVQ
FERQAQFIAD AAHELRTPLA ALKARVELGL RERDPQHWRS TLESAALGTD RLTHLANQLL
SLARIENGAR AIAEGGAQQL DLSQLARELG MAMAPLAHSR GVALALEADE PVWLRGEPTL
LNELLSNLID NALAHTSPGG NVVLRVYAPG VLEVEDDGPG IPPDERERVF ERFYRRSQQG
SGAGLGLAIV GEICRAHLAR ITLHEGAERG LKVRVSFSAT