Gene Psyr_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3956 
Symbol 
ID3369491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4704426 
End bp4705385 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content57% 
IMG OID637654313 
ProductMucB/RseB 
Protein accessionYP_237024 
Protein GI66047183 
COG category[T] Signal transduction mechanisms 
COG ID[COG3026] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.24974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCG TCCCTCTACT GCCGTTACTG CTTGGTGGAT GGCTTGCCCT CCCGGTACAG 
GCTGATGATG CGCAAGACGC AATCAATCGT CTTGCCAAGG TTGATCAGCA GCAGAGCTAT
CAAGGTACGT TTGTATACGA GCGCAATGGT AGTTTTTCTA CCCATCGAAT CTGGCACCGC
ATAGCGGACG GTCATATTCA GGAGCGCCTG CTACAGCTTG ATGGTTCCGC TCAGGAAGTA
TTGCGTGTTG ACGGGTTCAC TCAGTGCGTC AGCGGCACGC TGGAAGCGGG GGTGGCCAAT
CCGGCCGATT CTTCTGCCCG CGCATTCGAT GTCAAAAGAC TATCCGCCTG GTACGACATG
AAAATTGCCG GCAAATCCAG AGTGGCCGGT CGTCAGGCAA CTATCGTTGC GCTGTCCCCC
AAGGACCAGC ATCGATACGG CCTCGAATTG CACCTGGATA ACGAAACCGG TCTTGTGCTC
AAGTCGCTTC TGTTGAGTGA GAAGGGGCAG TTGCTCGAGC GTTTCCAGTT TACCGATCTC
GATACCGCCA GCGTGCTGTC CGAACAGATG CTCAAGACCA GTGCCGACTG CAAGCCTGTT
TCTGTGGTGA AGACCAAGCC TGAGGCCTCC ATCAGCCCTG TGGCCTGGCA CTCAGACTGG
CTGCCGCCGG GTTTTGACGT CAGCAGCAGC GGTGTGCGCA AAGACGCTGC TACGCAGTCG
GCGGTGACGC ATCTCATGTA CAGCGACGGT CTGGCGCGTT TTTCGGTGTT CATCGAATCG
GTGAAAGGTG GCGCGTCTTC GGATATTCGC ACTCAGCTAG GCCCGACAGT GGCCGTTTCC
CGCCGTCTGA CAACGCCGCA GGGCGACATG ATGGTGACGG TCGTCGGAGA AGTTCCGATG
GGCACTGCAG AGCGCATAGC ATTGTCGATG CGTAACGACG AACCTTCAGC CAATAAATAA
 
Protein sequence
MRAVPLLPLL LGGWLALPVQ ADDAQDAINR LAKVDQQQSY QGTFVYERNG SFSTHRIWHR 
IADGHIQERL LQLDGSAQEV LRVDGFTQCV SGTLEAGVAN PADSSARAFD VKRLSAWYDM
KIAGKSRVAG RQATIVALSP KDQHRYGLEL HLDNETGLVL KSLLLSEKGQ LLERFQFTDL
DTASVLSEQM LKTSADCKPV SVVKTKPEAS ISPVAWHSDW LPPGFDVSSS GVRKDAATQS
AVTHLMYSDG LARFSVFIES VKGGASSDIR TQLGPTVAVS RRLTTPQGDM MVTVVGEVPM
GTAERIALSM RNDEPSANK