Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3956 |
Symbol | |
ID | 3369491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4704426 |
End bp | 4705385 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637654313 |
Product | MucB/RseB |
Protein accession | YP_237024 |
Protein GI | 66047183 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3026] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.24974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCCG TCCCTCTACT GCCGTTACTG CTTGGTGGAT GGCTTGCCCT CCCGGTACAG GCTGATGATG CGCAAGACGC AATCAATCGT CTTGCCAAGG TTGATCAGCA GCAGAGCTAT CAAGGTACGT TTGTATACGA GCGCAATGGT AGTTTTTCTA CCCATCGAAT CTGGCACCGC ATAGCGGACG GTCATATTCA GGAGCGCCTG CTACAGCTTG ATGGTTCCGC TCAGGAAGTA TTGCGTGTTG ACGGGTTCAC TCAGTGCGTC AGCGGCACGC TGGAAGCGGG GGTGGCCAAT CCGGCCGATT CTTCTGCCCG CGCATTCGAT GTCAAAAGAC TATCCGCCTG GTACGACATG AAAATTGCCG GCAAATCCAG AGTGGCCGGT CGTCAGGCAA CTATCGTTGC GCTGTCCCCC AAGGACCAGC ATCGATACGG CCTCGAATTG CACCTGGATA ACGAAACCGG TCTTGTGCTC AAGTCGCTTC TGTTGAGTGA GAAGGGGCAG TTGCTCGAGC GTTTCCAGTT TACCGATCTC GATACCGCCA GCGTGCTGTC CGAACAGATG CTCAAGACCA GTGCCGACTG CAAGCCTGTT TCTGTGGTGA AGACCAAGCC TGAGGCCTCC ATCAGCCCTG TGGCCTGGCA CTCAGACTGG CTGCCGCCGG GTTTTGACGT CAGCAGCAGC GGTGTGCGCA AAGACGCTGC TACGCAGTCG GCGGTGACGC ATCTCATGTA CAGCGACGGT CTGGCGCGTT TTTCGGTGTT CATCGAATCG GTGAAAGGTG GCGCGTCTTC GGATATTCGC ACTCAGCTAG GCCCGACAGT GGCCGTTTCC CGCCGTCTGA CAACGCCGCA GGGCGACATG ATGGTGACGG TCGTCGGAGA AGTTCCGATG GGCACTGCAG AGCGCATAGC ATTGTCGATG CGTAACGACG AACCTTCAGC CAATAAATAA
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Protein sequence | MRAVPLLPLL LGGWLALPVQ ADDAQDAINR LAKVDQQQSY QGTFVYERNG SFSTHRIWHR IADGHIQERL LQLDGSAQEV LRVDGFTQCV SGTLEAGVAN PADSSARAFD VKRLSAWYDM KIAGKSRVAG RQATIVALSP KDQHRYGLEL HLDNETGLVL KSLLLSEKGQ LLERFQFTDL DTASVLSEQM LKTSADCKPV SVVKTKPEAS ISPVAWHSDW LPPGFDVSSS GVRKDAATQS AVTHLMYSDG LARFSVFIES VKGGASSDIR TQLGPTVAVS RRLTTPQGDM MVTVVGEVPM GTAERIALSM RNDEPSANK
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