| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3955 |
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| Symbol | |
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| ID | 3369490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4702696 |
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| End bp | 4704141 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654312 |
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| Product | peptidase S1, chymotrypsin:PDZ/DHR/GLGF |
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| Protein accession | YP_237023 |
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| Protein GI | 66047182 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAC CACGCATGAA ATCCTACTTT TCATTGATTG CCGCTGTGCT GATGCTCGGT
CAGGTTGCTA CGGCTCAGGC CGAAAACCTG CCGGACTTCA CCGGGCTGGT CGAGCAGGCA
TCGCCCGCAG TGGTGAATAT CAGTACGCGC CAGAAGTTGC CGGACCGTGC CGTCGCCAAT
CAGCAGATGC CTGATCTGGA AGGCCTGCCG CCGATGCTTC GCGAGTTTCT CGAGCGCAGC
ATGCCGCCAG GTTCGCGTCC GCCGGGCTCG GGTGCAGGCA AGGGTGATCG CCAGCGTGAG
GCTCAGTCCC TCGGCTCGGG CTTCATCATC TCCCCTGACG GCTACGTGCT GACCAACAAT
CATGTAATCG ATGGTGCTGA TGAGATTCTC GTACGCCTGT CCGATCGCAG CGAGTTGAAG
GCCAAACTGG TCGGTACCGA TCCGCGTACC GACGTTGCCG TTCTGAAGAT TGAGGGCAAG
GACCTGCCAA CCGCCAAACT GGGCAATTCC AATACGCTCA AGGTCGGTGA ATGGGTTCTG
GCGATCGGCT CGCCGTTCGG TTTCGATCAC TCCGTGACCA AGGGTATCGT CAGTGCCAAG
GGGCGCAGCC TGCCTAACGA CACCTACGTG CCGTTCATTC AGACCGACGT GGCCATCAAC
CCGGGTAACT CCGGTGGCCC GCTGTTCAAC ATGGCTGGCG AGGTCGTCGG GATCAACTCG
CAGATCTTCA CGCGTTCCGG TGGTTTCATG GGCCTGTCGT TCGCGATTCC GATCGACGTC
GCCATGGATG TGGCCAACCA GCTCAAGGCC AACGGCAAAG TCAGCCGCGG CTGGCTGGGT
GTGGTCATCC AGGAAGTGAA CAAGGACCTT GCCGAGTCGT TTGGTCTGGA CAAGCCTGCC
GGCGCGCTGG TTGCGCAAGT GCTTGAAGAC GGCCCGGCTG CCAAGGGCGG TGTGCAGGTG
GGTGACGTGA TTCTGAGCGC CAACGGCCAG CCCATCGTCA TGTCGGCCGA CCTGCCGCAC
CTGATCGGCA ACCTCAAGGA CGGCAGCAAG GCCGAACTTG AAGTGATTCG CGACGGCAAG
CGTCAGAAGC TGACGGTCAC CGTCGGCGCG CTGCCTGATG AAGGTCAGGA AATGGGCGAT
GTTGGCGGTA CGGGTGCCGA GCGCAGCAGT AATCGTCTGG GCGTATCGGT GATCGAGCTG
ACCGCCGAGC AGAAGAAATC CCTGGACCTC AAAGGTGGCG TTGCCATCAA GGAAGTCACC
GGCGGCCCGG CTTCGCTGAT CGGTCTGCAG GCGGGTGATG TGATCACTCA CCTGAACAAT
CAGGCGATCA CGTCCAGCAA GCAGTTCACC GAGGTGGCGA AAAGCCTGCC CAAGGATCGC
TCTGTCTCGA TGCGTGTTCT GCGTCAGGGC CGTGCGACCT TCATCACCTT TAAGCTGTCC
GAGTAA
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| Protein sequence | MSIPRMKSYF SLIAAVLMLG QVATAQAENL PDFTGLVEQA SPAVVNISTR QKLPDRAVAN
QQMPDLEGLP PMLREFLERS MPPGSRPPGS GAGKGDRQRE AQSLGSGFII SPDGYVLTNN
HVIDGADEIL VRLSDRSELK AKLVGTDPRT DVAVLKIEGK DLPTAKLGNS NTLKVGEWVL
AIGSPFGFDH SVTKGIVSAK GRSLPNDTYV PFIQTDVAIN PGNSGGPLFN MAGEVVGINS
QIFTRSGGFM GLSFAIPIDV AMDVANQLKA NGKVSRGWLG VVIQEVNKDL AESFGLDKPA
GALVAQVLED GPAAKGGVQV GDVILSANGQ PIVMSADLPH LIGNLKDGSK AELEVIRDGK
RQKLTVTVGA LPDEGQEMGD VGGTGAERSS NRLGVSVIEL TAEQKKSLDL KGGVAIKEVT
GGPASLIGLQ AGDVITHLNN QAITSSKQFT EVAKSLPKDR SVSMRVLRQG RATFITFKLS
E
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