Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3953 |
Symbol | |
ID | 3369488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4699864 |
End bp | 4700718 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654310 |
Product | Signal peptidase I |
Protein accession | YP_237021 |
Protein GI | 66047180 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTAA ATTTCCCGCT GTTGTTGGTC ATCGCTGTCT TCGTCTGTGG CGTGCTTGCA CTGATTGATC TGGTCATCCT GGCGCCTCGC CGCCGGGCTG CCATTTCCAA CTATCAGGGC AGCGTGGGCG AACCTGACAT TGCTGTCGTG GAGCGCTTGA ACAAGGAGCC TTTGCTGGTC GAGTACGGCA AATCGTTCTT CCCGGTGTTG TTTATCGTGC TGGTGCTTCG TTCGTTTCTG GTCGAGCCGT TCCAGATTCC TTCGGGCTCG ATGAAGCCGA CACTGGATGT GGGTGATTTC ATTCTGGTCA ACAAGTTCGC GTACGGCATT CGCCTGCCGG TACTGGACCA GAAGGTGATT CAGATCGGTG ATCCGCAGCG TGGCGACGTG ATGGTGTTCC GCTACCCGAG CGACCCGAGC GTCAACTACA TCAAGCGTGT CGTGGGTCTG CCAGGTGATC GTATCCGCTA CACCAGCGAC AAGCGGCTGT TCATCAATGG CGAGCTGGTC GCCAAGAAGC TGATCGGCAC CGAGCCCGGC ACATTGGGCA GCGCGGAACT GTACGAAGAG CAGCTGGGCG AAGTCGAACA TCAGATCCGT CAGGAAATGA GCCGCTACCG CGCGCCGCCT GACAGTGAAT GGACAGTGCC TGCCGCGCAC TACTTCATGA TGGGCGACAA CCGTGACAAC TCCAACGACA GCCGTTACTG GGATGATCCC AACATTCCCA AGGACGAGCT GGGCATGGTC CCGGACAAGA ACATCGTAGG CAAGGCGTTC GCGGTGTGGA TGAGCTGGCC CGAGCCGAAA CTGAGCCACT TCCCCAATTT TGCGCGTGTA GGGCTGATCA AGTAA
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Protein sequence | MSLNFPLLLV IAVFVCGVLA LIDLVILAPR RRAAISNYQG SVGEPDIAVV ERLNKEPLLV EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLDVGDF ILVNKFAYGI RLPVLDQKVI QIGDPQRGDV MVFRYPSDPS VNYIKRVVGL PGDRIRYTSD KRLFINGELV AKKLIGTEPG TLGSAELYEE QLGEVEHQIR QEMSRYRAPP DSEWTVPAAH YFMMGDNRDN SNDSRYWDDP NIPKDELGMV PDKNIVGKAF AVWMSWPEPK LSHFPNFARV GLIK
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