| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3947 |
|---|
| Symbol | |
|---|
| ID | 3369482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4695279 |
|---|
| End bp | 4696238 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654304 |
|---|
| Product | methyltransferase, putative |
|---|
| Protein accession | YP_237015 |
|---|
| Protein GI | 66047174 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATC TCGCTCCCCT CGTCCGTCGT CTGGCGGGAA CCCCTCTGGC CGACTGGGCC
AATGGCCTGC AAGCCCAGCT CGACACCAAG ATGGCCAAGG GTCACGGTGA CCTGCAGCGC
TGGCAAAGTG CGCTGGATGC CTTGCCCGAC CTGCAGCCCG AGCGAATCGA CCTGATCGAC
AGTTTTACCC TGGAAGCCGA GTGCAACGGC GAGACCCGCA CCGTGCTGCG CAAGGCATTG
CTTGGCCTGT CACCGTGGCG CAAGGGGCCG TTCAATGTGT TCGGCGTGCA TATCGACACC
GAATGGCGCT CGGACTGGAA GTGGTCGCGG GTTTCGCCAC ACCTGGACCT GAAGGGCAAA
CGCGTTCTGG ATGTCGGCTG CGGTAACGGT TATTACCAGT GGCGCATGCT TGGCGCCGGG
GCCGACAGCG TGATCGGGGT CGACCCCAAC TGGCTGTTCT TCTGCCAGTT CCAGGCCATG
CAGCGCTACC TGCCTGACCT GCCCGCCTGG CATCTGCCGT TCGCCCTGGA AGACTTGCCC
GCCAATCTGG AAGGCTTCGA CACAGTCTTC TCGATGGGCG TGCTGTATCA CCGCAAATCC
CCCATCGACC ACCTGCTGGC CTTGAAAGAC TGTCTGGTAA AAGGCGGCGA GCTGGTGATG
GAAACCCTGG TCGTGCCGGG TGATGTTCAT CAAGTGCTGG TCCCGGAAGA TCGTTATGCG
CAGATGCGCA ACGTCTGGTT CCTGCCTTCA GTGCCTGCTC TGGAATTGTG GATGCGCCGT
GCCGGCTTCA CCGATGTGCG TTGCGTCGAC GTCAGCCACA CGACGGTCGA CGAACAACGC
AGCACCGAGT GGATGCGCTT TCAGTCCCTG AGCGACTACC TGGACCCCAC CGATCACAGC
AAGACAGTCG AGGGCCTGCC CGCCCCCATG CGTGCGGTGA TCGTGGGGCG CAAGCCCTGA
|
|---|
| Protein sequence | MIDLAPLVRR LAGTPLADWA NGLQAQLDTK MAKGHGDLQR WQSALDALPD LQPERIDLID
SFTLEAECNG ETRTVLRKAL LGLSPWRKGP FNVFGVHIDT EWRSDWKWSR VSPHLDLKGK
RVLDVGCGNG YYQWRMLGAG ADSVIGVDPN WLFFCQFQAM QRYLPDLPAW HLPFALEDLP
ANLEGFDTVF SMGVLYHRKS PIDHLLALKD CLVKGGELVM ETLVVPGDVH QVLVPEDRYA
QMRNVWFLPS VPALELWMRR AGFTDVRCVD VSHTTVDEQR STEWMRFQSL SDYLDPTDHS
KTVEGLPAPM RAVIVGRKP
|
|---|
| |