Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3945 |
Symbol | |
ID | 3369480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4694046 |
End bp | 4694438 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654302 |
Product | hypothetical protein |
Protein accession | YP_237013 |
Protein GI | 66047172 |
COG category | [S] Function unknown |
COG ID | [COG5513] Predicted secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.432848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCTG CCCGTTTCAT TGCCCCGCTG AGCCTTGCGC TGCTGACGGC GTGCGCTCAG ACGCCGAAAA ACATTGTTTC CATCGACACG CAAAGCGACT GCCCGCTGAC ACTCACGTCC GGGCAGACAT TGATCCTGAC CCTGCCCAGC AACCCGACCA CCGGCTTTCG CTGGCTGACC CAGAACCCGG CCCAGAACAT CCTGCGCAGC CTGGGCCCTG AGGTGTATGC CAACGCCGAG AGCAAGGAAA TGGTCGGCAA CGGTGGGCAG TCGGTCTGGC GCTTCAAGGC CACCGATGCC GGGACCGGCC GGCTGATGAT GGTCTATCAG CAGCCCTGGG CACCCGAAGT CGCCCCGGAG CAGACCTTCG AGTGCGCCAT CAGCGTGAAG TGA
|
Protein sequence | MTPARFIAPL SLALLTACAQ TPKNIVSIDT QSDCPLTLTS GQTLILTLPS NPTTGFRWLT QNPAQNILRS LGPEVYANAE SKEMVGNGGQ SVWRFKATDA GTGRLMMVYQ QPWAPEVAPE QTFECAISVK
|
| |