Gene Psyr_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3945 
Symbol 
ID3369480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4694046 
End bp4694438 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID637654302 
Producthypothetical protein 
Protein accessionYP_237013 
Protein GI66047172 
COG category[S] Function unknown 
COG ID[COG5513] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.432848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTG CCCGTTTCAT TGCCCCGCTG AGCCTTGCGC TGCTGACGGC GTGCGCTCAG 
ACGCCGAAAA ACATTGTTTC CATCGACACG CAAAGCGACT GCCCGCTGAC ACTCACGTCC
GGGCAGACAT TGATCCTGAC CCTGCCCAGC AACCCGACCA CCGGCTTTCG CTGGCTGACC
CAGAACCCGG CCCAGAACAT CCTGCGCAGC CTGGGCCCTG AGGTGTATGC CAACGCCGAG
AGCAAGGAAA TGGTCGGCAA CGGTGGGCAG TCGGTCTGGC GCTTCAAGGC CACCGATGCC
GGGACCGGCC GGCTGATGAT GGTCTATCAG CAGCCCTGGG CACCCGAAGT CGCCCCGGAG
CAGACCTTCG AGTGCGCCAT CAGCGTGAAG TGA
 
Protein sequence
MTPARFIAPL SLALLTACAQ TPKNIVSIDT QSDCPLTLTS GQTLILTLPS NPTTGFRWLT 
QNPAQNILRS LGPEVYANAE SKEMVGNGGQ SVWRFKATDA GTGRLMMVYQ QPWAPEVAPE
QTFECAISVK