| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3944 |
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| Symbol | |
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| ID | 3369479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4691427 |
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| End bp | 4693844 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654301 |
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| Product | peptidase S16, ATP-dependent protease La |
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| Protein accession | YP_237012 |
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| Protein GI | 66047171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.036812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AGCAGACAGA CTCGCCAGAC TTGCCCAATG ACGCAGACGA GCACGACGTG
TCTCTGAGTT CCGACAGCAC CTCGCTGGCC TTGCCCGGCC AGAACCTGCC CGACAAGGTT
TACATCATTC CGATCCACAA CCGTCCGTTC TTTCCGGCGC AGGTCCTGCC TGTCATCGTC
AATGAAGAGC CGTGGGCCGA AACGCTGGAG CTGGTCAGCA AGTCCGAGCA CCATTCGCTG
GCGCTGTTCT TCATGGACAC TCCGCAGGAA GATCCACGCC ACTTCAAGAC TGACGCACTC
CCCGAGTACG GCACTCTGGT CAAGGTTCAC CACGCCAGTC GTGAAAATGG TCGTTTACAG
TTCGTCGCGC AGGGCCTCAG CCGGGTGCGC ATCCGTACCT GGCTCAAGCA TCATCGCCCG
CCGTATCTGG TAGAAGTCGA ATACCCGCAG CAGCCCAATG AGCCGACCGA TGAAGTGAAG
GCCTACGGCA TGGCCCTGAT CAACGCGATC AAGGAACTGC TGCCGCTCAA CCCGCTGTAC
AGCGAAGAGC TGAAGAATTA TCTCAACCGT TTCAGCCCCA ATGACCCCTC GCCGCTCACC
GACTTTGCCG CTGCCCTGAC CTCGGCCACC GGTGTCGAAT TACAGGAAGT ACTCGACTGT
GTGCCGATGC TCAGGCGCAT GGAGAAAGTC CTGCCGATGC TGCGCAAGGA AGTCGAGGTT
GCACGCCTGC AGAAGGAAAT CTCTGCCGAG GTGAACCGCA AGATCGGCGA GCATCAGCGG
CAGTTCTTCC TCAAGGAACA GCTCAAGGTC ATTCAGCAGG AGCTGGGCCT GAGCAAGGAC
GATCGCAGCG CCGACATCGA ACAGTTCGAG CAGCGCCTGG AAGGCAAGAC CCTGCCGCCA
CAGGCGCGCA AGAAGTTCGA CGAAGAAATC GGCAAGCTCA AGGTGCTGGA AACCGGCTCG
CCCGAATACG CCGTGACACG CAATTACCTG GACTGGACCA GCTCGTTGCC ATGGGGCGTC
TACGGCGCCG ACAAGCTGGA TCTCAAGCAC GCACGCAAGG TGCTCGATCA GCACCATGCC
GGGCTTGACG ATATCAAGGC GCGGATTCTC GAATTCCTTG CGGTGGGTGC CTACAAGGGC
GAAATCAGCG GCTCGATCGT GCTGCTGGTC GGCCCGCCGG GGGTGGGCAA GACCAGTGTC
GGGCGCTCGA TTGCCGAGTC GCTGGGGCGA CCGTTCTATC GCCTGAGCGT GGGCGGCATG
CGCGACGAGG CGGAAATCAA GGGCCACCGC CGTACCTATA TCGGTGCGCA ACCGGGCAAG
CTGGTGCAGG CGTTGAAAGA CGTTGAAGTC ATGAACCCGG TCATCATGCT CGATGAAATC
GACAAGATGG GCCAGAGCTA TCAGGGCGAC CCGGCGTCTG CCCTGCTGGA AACCCTGGAC
CCGGAACAGA ACGTCGAGTT TCTCGATCAC TACCTGGACC TGCGCCTGGA CCTCTCCAAG
GTCCTGTTCG TGTGCACGGC CAACACGCTG GACTCGATCC CCGGCCCGCT GCTTGACCGG
ATGGAAGTGA TTCGCCTGTC CGGCTATATC ACCGAAGAGA AGCTGGCAAT CGCCAAACGC
CACTTGTGGC CCAAGCAGTT GGCGAAAGCC GGCGTTGCGA AAAACAAGCT GAGCATCAGC
GACAGCGCAC TGCGCGCCGT CATCGAGGGT TACGCTCGCG AAGCCGGTGT GCGGCATCTG
GAGAAACAGC TTGGCAAGCT GGTGCGCAAA GCTGTCGTGA AACTGCTGGA CGAGCCCGAT
TCAGTGATCA AGATCGGGCC GAAAGACCTC GAAGCGTCGC TGGGCATGCC GGTGTTCCGC
AGCGAACAGG TGCTGTCCGG CACCGGCGTG ATCACCGGTC TGGCATGGAC CAGTATGGGC
GGCGCTACCC TGCCGATCGA GGCGACGCGC ATTCATACGC TCAACCGCGG CTTCAAGCTG
ACCGGGCAAT TGGGCGATGT GATGAAGGAG TCGGCCGAAA TTGCCTACAG CTACGTCAGC
GCCAATCTGT CGAAGTTTGG TGGTGATGCG AAGTTCTTCG ATGAGGCGTT CGTGCACGTA
CACGTCCCCG AAGGTGCCAC CCCGAAAGAC GGCCCGAGTG CGGGTGTGAC CATGGCCAGC
GCCTTGCTGT CCCTGGCCCG CAACCAGCCG CCGAAAAAAG GCGTCGCCAT GACCGGCGAA
CTGACCCTGA CCGGGCATGT ACTGCCCATC GGCGGCGTCC GCGAAAAAGT CATTGCCGCG
CGGCGCCAGA AGATCCACGA ACTGATCCTG CCGGAGCCTA ACCGTGGCAA CTTCGAAGAA
CTGCCGGACT ATCTCAAGGA AGGCATTACC GTGCACTTCG CCAAACGCTT CGCCGACGTG
GTGAAGGTGT TGTTCTAA
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| Protein sequence | MSDQQTDSPD LPNDADEHDV SLSSDSTSLA LPGQNLPDKV YIIPIHNRPF FPAQVLPVIV
NEEPWAETLE LVSKSEHHSL ALFFMDTPQE DPRHFKTDAL PEYGTLVKVH HASRENGRLQ
FVAQGLSRVR IRTWLKHHRP PYLVEVEYPQ QPNEPTDEVK AYGMALINAI KELLPLNPLY
SEELKNYLNR FSPNDPSPLT DFAAALTSAT GVELQEVLDC VPMLRRMEKV LPMLRKEVEV
ARLQKEISAE VNRKIGEHQR QFFLKEQLKV IQQELGLSKD DRSADIEQFE QRLEGKTLPP
QARKKFDEEI GKLKVLETGS PEYAVTRNYL DWTSSLPWGV YGADKLDLKH ARKVLDQHHA
GLDDIKARIL EFLAVGAYKG EISGSIVLLV GPPGVGKTSV GRSIAESLGR PFYRLSVGGM
RDEAEIKGHR RTYIGAQPGK LVQALKDVEV MNPVIMLDEI DKMGQSYQGD PASALLETLD
PEQNVEFLDH YLDLRLDLSK VLFVCTANTL DSIPGPLLDR MEVIRLSGYI TEEKLAIAKR
HLWPKQLAKA GVAKNKLSIS DSALRAVIEG YAREAGVRHL EKQLGKLVRK AVVKLLDEPD
SVIKIGPKDL EASLGMPVFR SEQVLSGTGV ITGLAWTSMG GATLPIEATR IHTLNRGFKL
TGQLGDVMKE SAEIAYSYVS ANLSKFGGDA KFFDEAFVHV HVPEGATPKD GPSAGVTMAS
ALLSLARNQP PKKGVAMTGE LTLTGHVLPI GGVREKVIAA RRQKIHELIL PEPNRGNFEE
LPDYLKEGIT VHFAKRFADV VKVLF
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