Gene Psyr_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3943 
Symbol 
ID3369478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4690574 
End bp4691248 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637654300 
Producthypothetical protein 
Protein accessionYP_237011 
Protein GI66047170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00343132 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAACG TATTTATTTC TGCATTAGTG GCAGGACTGT GGATAGCATC GGCTGCAAAC 
GCATCGGCTT CCAGCTTTAC TGCCCAGGTA ATGGACAAGG AAGGCAAGCC CCTTGCAGAT
GCGGTGGTAA CGCTCAAAGG GCCGCCCGAT CCTTCACCTA TCGTGTTGAA GGCGTCAATG
GACCAGCGTG ATCAGGAGTT TGCACCACAT GTACTGGCCG TCCACGCCGG CACCCAGGTC
AAGTTTCCCA ACAGCGACAA CATCCGCCAC CAGGTCTACT CCTTTTCTCC GGCCAAGCGC
TTCGAGTTGC GGCTTTACGA GGGCGTGCCC TCGGATCCGC TGTTGTTCGA CAAGCCCGGC
GTGGTGGTGC TGGGCTGCAA CATCCACGAC TGGATGGTCG GTTACATCTA CGTCACCGAC
GATTCATGGT TCGGCGTGAC CGACAGAAAC GGCCTGCTCA AGCTGGATCA GGTGCCGGCC
GGGCATTATG CCGCCACCCT CTGGCATCCG CGCATCGCGG ACATGCAGCC TGTATCGGGC
GGCGAGTTCG AGGTGCCGGC GGCAGGCCTC ACCCAGCGTT TCAACCTGGC GGTCGAAGTG
GAGGCCGAGG ACAAACCCGG CAAGCCCGCA CCGGGCCGCT TCGGTGACGC CTTCCACGAG
GCCACGCATG AATGA
 
Protein sequence
MTNVFISALV AGLWIASAAN ASASSFTAQV MDKEGKPLAD AVVTLKGPPD PSPIVLKASM 
DQRDQEFAPH VLAVHAGTQV KFPNSDNIRH QVYSFSPAKR FELRLYEGVP SDPLLFDKPG
VVVLGCNIHD WMVGYIYVTD DSWFGVTDRN GLLKLDQVPA GHYAATLWHP RIADMQPVSG
GEFEVPAAGL TQRFNLAVEV EAEDKPGKPA PGRFGDAFHE ATHE