Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3943 |
Symbol | |
ID | 3369478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4690574 |
End bp | 4691248 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654300 |
Product | hypothetical protein |
Protein accession | YP_237011 |
Protein GI | 66047170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00343132 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAACG TATTTATTTC TGCATTAGTG GCAGGACTGT GGATAGCATC GGCTGCAAAC GCATCGGCTT CCAGCTTTAC TGCCCAGGTA ATGGACAAGG AAGGCAAGCC CCTTGCAGAT GCGGTGGTAA CGCTCAAAGG GCCGCCCGAT CCTTCACCTA TCGTGTTGAA GGCGTCAATG GACCAGCGTG ATCAGGAGTT TGCACCACAT GTACTGGCCG TCCACGCCGG CACCCAGGTC AAGTTTCCCA ACAGCGACAA CATCCGCCAC CAGGTCTACT CCTTTTCTCC GGCCAAGCGC TTCGAGTTGC GGCTTTACGA GGGCGTGCCC TCGGATCCGC TGTTGTTCGA CAAGCCCGGC GTGGTGGTGC TGGGCTGCAA CATCCACGAC TGGATGGTCG GTTACATCTA CGTCACCGAC GATTCATGGT TCGGCGTGAC CGACAGAAAC GGCCTGCTCA AGCTGGATCA GGTGCCGGCC GGGCATTATG CCGCCACCCT CTGGCATCCG CGCATCGCGG ACATGCAGCC TGTATCGGGC GGCGAGTTCG AGGTGCCGGC GGCAGGCCTC ACCCAGCGTT TCAACCTGGC GGTCGAAGTG GAGGCCGAGG ACAAACCCGG CAAGCCCGCA CCGGGCCGCT TCGGTGACGC CTTCCACGAG GCCACGCATG AATGA
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Protein sequence | MTNVFISALV AGLWIASAAN ASASSFTAQV MDKEGKPLAD AVVTLKGPPD PSPIVLKASM DQRDQEFAPH VLAVHAGTQV KFPNSDNIRH QVYSFSPAKR FELRLYEGVP SDPLLFDKPG VVVLGCNIHD WMVGYIYVTD DSWFGVTDRN GLLKLDQVPA GHYAATLWHP RIADMQPVSG GEFEVPAAGL TQRFNLAVEV EAEDKPGKPA PGRFGDAFHE ATHE
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