Gene Psyr_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3940 
Symbol 
ID3369475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4686916 
End bp4687344 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID637654297 
Producthypothetical protein 
Protein accessionYP_237008 
Protein GI66047167 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0304408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00309089 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCGCT TGCTGATAGC CATGATGCTG ACGCTGCTGG CCGGTTGCGC GCAGCAGCAA 
CAACCACCCA AGGATGACAG CCTCTACCAG GACCTGGGTC AGCGTGCCGG TATCCAGCGC
ATCGTCGAAG GCATGCTGAT AAACGTGGCC AGGGATCAGC GGATCGTCGA GCACTTCAGG
AAAGTCGACA TCGTGCGGCT GCGCGACAAA CTGGTCGAGC AACTCTGCGT CGAGTCCGGC
GGCCCGTGTC GCTATACCGG CGACAGCATG GCCGAGGCGC ACAAGGGCCA GAACCTGACG
CCCAGCGATT TCAACGCGCT GGTCGAAGAT CTGATCGCCT CGATGGACAC CGAAAAGGTC
CCGGTCCCCG CACAAAACCG CCTCATCGCC CGTCTGGCAC CGATGCGCGG CGAAGTGATC
GGCAAGTAA
 
Protein sequence
MRRLLIAMML TLLAGCAQQQ QPPKDDSLYQ DLGQRAGIQR IVEGMLINVA RDQRIVEHFR 
KVDIVRLRDK LVEQLCVESG GPCRYTGDSM AEAHKGQNLT PSDFNALVED LIASMDTEKV
PVPAQNRLIA RLAPMRGEVI GK