| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3925 |
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| Symbol | |
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| ID | 3369460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4667696 |
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| End bp | 4670833 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654282 |
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| Product | hypothetical protein |
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| Protein accession | YP_236993 |
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| Protein GI | 66047152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.511615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.283533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAC AATCGACTAT GGGCGCATTT CGGCATTCCG ATAGCAAGCA AGAGACGCTA
TCCGCTGATC GTGAGGATAA TCCTCGTACG CCCAAATATC CGCGTCGCAA GCGATACGGA
TGGCGGGTGT TCTGGGTAGT GGTGGTGTTA GCCGGGGTTG CATTGGGCGT GGCGGTGGCG
GTGGAGAGCA GGACCTCCAG GCTTCAGGCG CGGGAATTCA GCCGCTTTGC CGCGAGCCTG
GGTTATTCAA TGCAGCCCGG GCCTAGTCAT GACGTGGTGT ATCCCGGTGA CGGGCCGTTC
GACCGGCGCC TGGGCTATTC ATCCATGGAT GAATTCCTCT CGCGCCTGCT CAAGCGCGAT
TATGTGATTA CGCGTCAGAC CCGGTTTTCG CCGGAACTGT TGCGTTACGT CCGGCATGGT
TTTTTCGTGC CTTACGAGGA AAAAACCCAG GCCGGGCTGT CGATCACCGA TTGCCGAAAC
GAGCCGCTGT ACGAGTTCAG ATACCCACAG CAGTTTTACC CGACCTTCGC CGCCATTCCG
CCGATGCTGG TGAACAGTCT GCTGTTTATC GAAAACCGTG ATCTGCTTGA TCCGCAGCAG
CCCATGGCCA ACCCTGCGGT GGACTGGCCA CGTTTTGTCA AAGCCGCCTG GTCGCAACTG
GCGAAGATGT TTGCCCTCCC CGGCCAGTCG GCTGGGGGCA GCACGCTGGC CACTCAGCTG
GAAAAATACC GTCACTCCCC AGACGGACTG ACGCTGTCGG GTTCGGAAAA GCTGCGGCAG
ATGATTTCCG CCAGCGTTCG CGCCTATCAG CCGGGGACCG AGACACTCGC CGTGCGCCAG
CGAGTGGTGC GTGACTACCT GAACAGCGTG CCGCTGTCTG CGGTGCCGGG GCATGGCGAG
GTGCATGGTC TGGCCGAAGG ACTGAGGGTG TGGTTCGGCG CAGACTTCGG CAAAACCAAC
GAGATACTGG CTTCGAATCC GGGCAATAAA CAGGCGCTGG CCGACAAGGC GCTGGCGCTG
CGTGAAGTGC TCTCACTGGT AATCGCCCAA CGTCGCCCGT CGCACTATCT GGCCAAGGGA
CGCCAGGAAT TGGCAGAGCT GACCGACAGC CACATCCGCC TGCTGGCCCA GGCCAACGTC
ATCGACCGAC CGCTGGCCGA GGCCGCGCTG GCAGCCCATG TCACCTACCG CGACTGGGCG
CAGCAACCGA CCCTGCAGCC CATCGAAACC AATAAGGGCA TCAGTGTCGC GCGCACTCGC
CTGTCGAATC TGCTCAATCG CCCGCTTTAC GACCTGGACC GTCTTGACCT GTCCGCCACC
AGCACCCTGC ATGGCGAATT GCAGCGCAGC GTGAGCCAGT ACCTGCGTGA CCTGGCCAAC
CCTGAGTTTG CCGCAAAGAC CGGTTTGATG GGCGAGCGCC TGTTGACCCC GGCCAGCACA
ACGCAGGTGC GCTACAGCTT CACGCTGTTT GAACGCGGCG TGGATGGCTC GCGGGTCAGG
GTCCAGACCG ACAGCACCGA TCAGCCGTTC GATATCAACG AAGGCAGCAA GCTGGAGCTG
GGCTCGACGG CGAAGATGCG CGTGCTGACG ACGTATCTGG AGATCATCGC CGAGTTGCAT
GGGCGCTATT CGGGCTTGAG CCCTGCGCAG TTGCGCAAAG TCCCGGTCGA GGAACCGGAT
CGGCTGACCC GTTGGGCGGT GGATTATCTG CTGCTGAACA AGGACCGTGA CCTGGCGAAG
ATGCTTTCGG CCGCACTCGA CCGCACCTAT TCGGCCAGCC CCGCAGAAGC GTTCTTCACC
GGTGGCGGCA TGCACCGTTT CAATAATTTC CGGCGCGAAG ACAACGAGCG GATTCCGACC
CTGCGCGAGT CGCTGCGTGA GTCGATCAAC CTGCCGTTCA TTCGTCTGAT GCGCGATGTG
GTGCGCTACA GCACCTATCA GGCGCCCAAC AACAGCGCCG AGCTGCTCAA GGATGATGAC
AACCCGCGCC GCCAGGAATA CCTGGCGCAG TTTGCCGACC GCGAAGGCAC GGTATTCCTG
CTGCGCTTCT GGAAACGCTA CAAGGAAAAG ACCACGCAGG AGCGGCTCGA CACCTTCCTC
GACGGCATTC ACCCGACGGC GATCCGCCTG GCTGCGGTAC ACCGTTACCT GTTGCCGGGC
GCTGATCAGG GCACATTCAA CGCGTTCATC CGCGCCCACC TGGACGAGCC CAGGGCGAGT
TCGAGACTCA CCGACAAACG TCTCGCCGAT CTGTACCAGA GTTACGGTCC GGGCACTTAT
GACCTGCCCG ATCAAGGCTA CATCGCCCGC GTCCATCCGC TGGAACTGTG GCTGGTAGGC
TACCTGCTCA AGCACCCGGA AGCACAGTTC AAGGACGCGG TGGCCGCCAG TCGTTACGAA
CGTCAGGAAG TCTATGGCTG GCTGTTCAAG AGTCGCCACA AAGGCGCTCG CGACAGCCGG
GTGCGGACCA TGATGGAGGT CGAAGCGTTT CTGGACATCG AGCAACGCTG GCAGCGCGTG
GGTTATCCGT TCGACCATCT GGTGCCTTCG CTGGCGACGG CTATCGGCAG CTCGGGAGAC
CGTCCGGCGG CGCTTGCCGA GCTGATCGGC ATCATCCAGA ACGACGGTAT CCGCCTGCCT
GCGGTGCGCA TCGACAGTCT GCACTTTGCC GCCGACACGC CTTATGACAC TCAACTGAGC
ATCAACCCGG AGCTGGGCAA GCGTGTGTTG CCATCGGAAG TCGCCGCGGC AATGCGCGAG
GCCTTGTCGC AAGTGGTGGA CGGCGGCACG GCCAAACGCG TGCAAGGCAC GTTCAAGATG
CAGGACGGCA GCGTGCTGGC GATGGGCGGC AAGACCGGCA CCGGCGACAA CAGGATCGAA
AGCGTCGGTG CGGGCGGGCG AATTCTCAGC TCAAGAGCGA TCAACCGCAC GGCGACTTTC
GTGTTTTATA TCGGCGACAA CCACTTTGGC GCGCTCACGG CGTTCGTGCC GGGGCGCGCT
GCCGAGGGCT TTCGCTTCAC CTCGGCGTTG CCGGTGCAGG TGCTCAAAGG CATGGCACCG
ATTTTGACGC CTTACCTGGA AAACCACGGA CAGGCGATGT GCAATGCCCC GCTCGCCGAT
GCGCCCAAGG GTGTCTGA
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| Protein sequence | MTGQSTMGAF RHSDSKQETL SADREDNPRT PKYPRRKRYG WRVFWVVVVL AGVALGVAVA
VESRTSRLQA REFSRFAASL GYSMQPGPSH DVVYPGDGPF DRRLGYSSMD EFLSRLLKRD
YVITRQTRFS PELLRYVRHG FFVPYEEKTQ AGLSITDCRN EPLYEFRYPQ QFYPTFAAIP
PMLVNSLLFI ENRDLLDPQQ PMANPAVDWP RFVKAAWSQL AKMFALPGQS AGGSTLATQL
EKYRHSPDGL TLSGSEKLRQ MISASVRAYQ PGTETLAVRQ RVVRDYLNSV PLSAVPGHGE
VHGLAEGLRV WFGADFGKTN EILASNPGNK QALADKALAL REVLSLVIAQ RRPSHYLAKG
RQELAELTDS HIRLLAQANV IDRPLAEAAL AAHVTYRDWA QQPTLQPIET NKGISVARTR
LSNLLNRPLY DLDRLDLSAT STLHGELQRS VSQYLRDLAN PEFAAKTGLM GERLLTPAST
TQVRYSFTLF ERGVDGSRVR VQTDSTDQPF DINEGSKLEL GSTAKMRVLT TYLEIIAELH
GRYSGLSPAQ LRKVPVEEPD RLTRWAVDYL LLNKDRDLAK MLSAALDRTY SASPAEAFFT
GGGMHRFNNF RREDNERIPT LRESLRESIN LPFIRLMRDV VRYSTYQAPN NSAELLKDDD
NPRRQEYLAQ FADREGTVFL LRFWKRYKEK TTQERLDTFL DGIHPTAIRL AAVHRYLLPG
ADQGTFNAFI RAHLDEPRAS SRLTDKRLAD LYQSYGPGTY DLPDQGYIAR VHPLELWLVG
YLLKHPEAQF KDAVAASRYE RQEVYGWLFK SRHKGARDSR VRTMMEVEAF LDIEQRWQRV
GYPFDHLVPS LATAIGSSGD RPAALAELIG IIQNDGIRLP AVRIDSLHFA ADTPYDTQLS
INPELGKRVL PSEVAAAMRE ALSQVVDGGT AKRVQGTFKM QDGSVLAMGG KTGTGDNRIE
SVGAGGRILS SRAINRTATF VFYIGDNHFG ALTAFVPGRA AEGFRFTSAL PVQVLKGMAP
ILTPYLENHG QAMCNAPLAD APKGV
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