Gene Psyr_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3921 
Symbol 
ID3369456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4663723 
End bp4664853 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID637654278 
Producthypothetical protein 
Protein accessionYP_236989 
Protein GI66047148 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.523017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG GACGCGATCA TCGAATCGAC TTCTTTCGCG GCCTGGCGCT GATCTTCATC 
TTCTGGGATC ACGTGCCGGA CAATCCCCTG GCGCAACTGA CCGTACGCAA CTTCGGCTTC
AGCGACGCAG CGGAAATCTT CGTTTTCCTC GCCGGTTACG CGTCGATCCT GGCCTACGGA
CGGATCGCCC GACGTGACGG CATGCTGGTG GCTGGCGTGC GAATCCTGCG CCGGACCTGG
GTGCTGTATG TGGTGCATAT CTTTCTGCTG ACCCTGCTGA TGGGCATCGT CTTCGTCGCC
AACAACCACG TCGAGACGCG CGACATGGTC CAGCAGATGG GCCTTGAATA CTTTGTCGGC
AACCCGCAAC AGGCATTGGC CGATGAACTG CTGCTGCGCT TCAAACCCAA CCTGACCGAC
CCGTTGCCGC TGTATATCGT GCTGTTGCTG ACTTTGCCGC TGAGCTTGCC ATTGATGCTG
CGCAAACTCG AAGTGGCAGT CGGCCTGTCG ATTGCCCTGT ACCTGATGGT GCCGTTACTG
GGCTGGAACC TGCGCGCTTA CGAAGGCGGC GGTGTCTGGT ACTTCAACCC GGTGGCCTGG
CAGCTGCTGT TCGTGCTCGG CGGTGCGTGC GCGTTGCGCA GCGAAACAGC CACGACAGCT
GAGCGCCCTC CGTTGCGCCA GCAACCCTTG TTCATGCTGG CCGCCATCTA CGTGCTGATC
GCATGCATCC TGACCTTCAG CGAAAAATGG CCCGGGCTGC ACGCCGCGCT GGTCTCCAGC
CTGCACCTTG AAAGCCTTTA CCCGATCAGC AAGACCGATC TTGCGCCCGT CCGGTTACTG
CACTTCCTTG CCCTGGTCTA CGTCGTCGCC CGACTGCTGC CAACCTCAAG CACCTGGCTG
GAAAACTGGC CTGCGCGCCA GACCTGTCGC ATGGGCCGCT ATTCACTGGA AGTCTTTTGC
CTGGGCGTCC TGCTCGCCCC GTTGGCTGAC ATGGCCAATG CACTGGCAGG CGATACATGG
CCCATGCAAG TGACGACCGC AATTGTCGGC CTGGGGTTGA TGATGTTGAT GGCCAATGGG
CTGGAGTTGA ATAAACGCCT AGGGACATCG CCACACCTGT TGCCAACTTG A
 
Protein sequence
MNNGRDHRID FFRGLALIFI FWDHVPDNPL AQLTVRNFGF SDAAEIFVFL AGYASILAYG 
RIARRDGMLV AGVRILRRTW VLYVVHIFLL TLLMGIVFVA NNHVETRDMV QQMGLEYFVG
NPQQALADEL LLRFKPNLTD PLPLYIVLLL TLPLSLPLML RKLEVAVGLS IALYLMVPLL
GWNLRAYEGG GVWYFNPVAW QLLFVLGGAC ALRSETATTA ERPPLRQQPL FMLAAIYVLI
ACILTFSEKW PGLHAALVSS LHLESLYPIS KTDLAPVRLL HFLALVYVVA RLLPTSSTWL
ENWPARQTCR MGRYSLEVFC LGVLLAPLAD MANALAGDTW PMQVTTAIVG LGLMMLMANG
LELNKRLGTS PHLLPT