| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3919 |
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| Symbol | ddl |
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| ID | 3369454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4661904 |
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| End bp | 4662995 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654276 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_236987 |
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| Protein GI | 66047146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.27971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.219568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAAAGT CAGTCGCCAT CGTTTTTGGT GGGCAATCCA GCGAGCATGA GGTTTCGTTG
CAGTCGGCAC GCAACGTGAT CAATGCGATT GATCGTGAAC GCTATGCACT GACCCTGATC
GGCGTCGACA AGCTGGGCCG CTGGCTGCAT TTCGACGAAG CCGATTACCT GCTTAATGCC
ACTGATCCTG CACGGATCAA ACTAAGCGCA TCAGGCAAGC CATTGTCCTT GCTGCCGGGC
AGTATCGGCG GGCAGTTTGT CGACGTCGAG TCAGGCCAGC CACTGGCAGC CATCGATGTG
GTATTCCCGC TGATCCACGG CGCTTTTGGT GAAGACGGCG CGTTGCAGGG TCTGCTGCGC
ATGCTGTCCG TGCCTTTTGT CGGCGCCGAT GTGCTGTCCT CTGCGGCCTG CATGGACAAG
GACGTGACCA AGCGTCTGCT GCGCGATGCG GGCATTGCCG TCGCGCCGTT CAGGGTCCTG
TCGCGTGGAG AGAGCCTTTC TTTCACGGAG GCTGCCGACC AGTTGGGGCT GCCGATGTTC
GTCAAGCCGG CCAACCAGGG TTCATCGGTG GGCGTGAGCA AGGTGTCTGA CGAGGCCGGT
TTCGCGGCAG CACTGGCGCT GGGTTTCGAG TTCGATCACA AGCTGCTGAT CGAGCAGGGC
ATCGTTGGCC GGGAAGTGGA GTGCGCGGTA TTGGGTAACT TCGATGCGCA GGTCAGTGTC
TGTGGCGAAG TGATTGCCAA CGATGAATTC TATGCCTACG ACACCAAGTA CCTGAATGGC
GATCAGGCAC GCATCGCCAT TCCCGCCGAG CTGCCCGCCG ACCTGAGTGA TCAGGTGCGT
GACGTCGCGT TGCAGGCGTA CAAGGTGCTG GGCTGCGCAG GGCTCTCGCG GGTCGATTTC
TTCGTCACCG AAGGGCGCGA CATCATCATC AACGAGGTCA ACACGCTGCC GGGCTTCACC
TCGATCAGCA TGTACCCCAA GCTCTGGCAG GCCAGCGGTC TGTCGTATGC CGAACTGATC
CATCGCCTGA TCGTTCTGGC GCTGGAACGG GCTGATCAGG CGCGGCTGCT GAAAACGGAG
ATCTTTCCAT GA
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| Protein sequence | MKKSVAIVFG GQSSEHEVSL QSARNVINAI DRERYALTLI GVDKLGRWLH FDEADYLLNA
TDPARIKLSA SGKPLSLLPG SIGGQFVDVE SGQPLAAIDV VFPLIHGAFG EDGALQGLLR
MLSVPFVGAD VLSSAACMDK DVTKRLLRDA GIAVAPFRVL SRGESLSFTE AADQLGLPMF
VKPANQGSSV GVSKVSDEAG FAAALALGFE FDHKLLIEQG IVGREVECAV LGNFDAQVSV
CGEVIANDEF YAYDTKYLNG DQARIAIPAE LPADLSDQVR DVALQAYKVL GCAGLSRVDF
FVTEGRDIII NEVNTLPGFT SISMYPKLWQ ASGLSYAELI HRLIVLALER ADQARLLKTE
IFP
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