Gene Psyr_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3915 
Symbol 
ID3369450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4658582 
End bp4659574 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content61% 
IMG OID637654272 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_236983 
Protein GI66047142 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.226333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTT TAATTTTTCT GGCCGCGCTT CTGTGCGGCT TGCCGTCTTT TGCGGCCGAT 
CGTTGTGATA CCGATGTTCC TGTACAGATG GCCAACCTCA AGGATGTGCG GATTGCCTAC
CAGAGTATTG GCAGCGAGTC CGACCCTGCC TTGCTGTTGG TGATGGGGCT GGGTGGGCAG
TTGATTCACT GGCCGGACGA GGTCGTGGTC GCGTTGTGTC AGCAAGGCTA TCGGGTGATT
CGTTACGACA ATCGCGATGT GGGTCTGTCT TCGTGGGTGC AACAGCCAGC GGATGCCAAT
CTGACGTTCG AAGTGCTGCG TTACAAACTT GGCCTGCCTG TCTCGGCACC CTATTCGTTG
ACTGATATGG CCGACGATGC GCTGGGTCTG ATGGATGCAT TGCAGATTCG CCAGTTTCAC
GTGTTGGGCG CGAGCATGGG CGGCATGATC GCTCAGCATC TGGCCGATCT GGCGCCGTCG
CGGGTCGAAA GCCTGACGCT GATCATGACC AGTTCCGGTG CGCAGGGTTT GCCTATGCCC
AGTACCGCGC TGATGCAACT GTTGGCGCGG CGCGGCGCGC CCAATCGGGA AGTGGCGATC
GAGCAACAGG CCGATCTGCT TGCCGCGCTG GGCAGCCCGC AGGTCAAGGA CGATCGCCAG
CAATTGCTGC ATCAGGCGGC TGTTTCCTAT GACCGGGCGT TCAATCCCGA AGGTGTGAAA
CGCCAGATCA TGGCGATTCT GGCCGAGCCC AGCCGCGTGG AACTGCTGAA CCGTCTGCGT
CTGCCGGTAC TGGTGGTTCA CGGCACGGCT GACCCGCTGC TGCCGGTCAT GCATGGTGTG
CATGTGGCCG CGCACATTCA GGGCAGCCAG CTGCGCCTGA TTCCGGGGCT GGCGCACCGT
TTTCAGGAGG CCTTCAAGGC CCCGTTGCTC GGTGCAGTGC TGCCGTACCT GAAGGCCCAG
CATGAAGACG GACGCAACCT GGCTCAGTTG TAA
 
Protein sequence
MRVLIFLAAL LCGLPSFAAD RCDTDVPVQM ANLKDVRIAY QSIGSESDPA LLLVMGLGGQ 
LIHWPDEVVV ALCQQGYRVI RYDNRDVGLS SWVQQPADAN LTFEVLRYKL GLPVSAPYSL
TDMADDALGL MDALQIRQFH VLGASMGGMI AQHLADLAPS RVESLTLIMT SSGAQGLPMP
STALMQLLAR RGAPNREVAI EQQADLLAAL GSPQVKDDRQ QLLHQAAVSY DRAFNPEGVK
RQIMAILAEP SRVELLNRLR LPVLVVHGTA DPLLPVMHGV HVAAHIQGSQ LRLIPGLAHR
FQEAFKAPLL GAVLPYLKAQ HEDGRNLAQL