Gene Psyr_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3913 
Symbol 
ID3369448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4656319 
End bp4657647 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content60% 
IMG OID637654270 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_236981 
Protein GI66047140 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.289305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.253976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAA ACAGCGACCT GACCGTCCTG ATCGTCGAAG ACGATCCGCA TGTATTGCTC 
GGCTGCCAGC AGGCCCTCGC GCTGGAAGAC ATCGCCAGCG AGGGCGTTTC GAGCGCCGAA
GAGGCCTTGA AACGTATTGA TGACAACTTC GCCGGTATCG TCATCAGCGA TATTCGCTTG
CCGGGTATCG ACGGGCTGGA GTTGCTGAGC CGTCTCAAGG CACGTGACAG CAGCCTGCCG
GTGGTGCTCA TCACCGGCCA TGGCGACATC ACCATGGCCG TCAACGCAAT GCGCGATGGC
GCTTACGATT TCATGGAGAA ACCCTTTTCG CCTGAGCGTC TGGTCGACGT CACCCGGCGC
GCACTGGAGC AACGCGGCCT GGCCCGTGAA GTGTGGGCCT TGCGCAAGCA ACTGGCCGAA
CGCGATTCGC TGGAAGGCCG GATCATCGGC CGCTCCCCGG CCATGCAAAA CCTGCGTGCG
TTGATTGCCA ACGTCGCCGA CACCTCGGCC AACGTACTGA TCGAAGGTGA AACCGGCACG
GGCAAGGAAC TGGTCGCGCG CTGCCTGCAC GATTTCAGTC GGCGCAAGGA CAGCCAGTTC
GTGGCGCTCA ACTGTGGCGG GCTGGCGGAA AGCCTGTTCG AGTCGGAAAT CTTCGGCCAT
GAAGCCAACG CCTTTACCGG CGCGGGCAAG CGGCGCATCG GCAAGATCGA ACACGCGCAC
AACGGCACGC TGTTTCTCGA TGAAGTGGAA AGCATGCCGG TCAATCTGCA GATCAAGCTG
CTGCGCGTCC TGCAGGAGCG AACCCTCGAG CGGCTGGGTT CCAACCAGAG CGTCGCCGTG
GATTGCCGGG TCATAGCGGC GACCAAATCC GATTTGAATG CCTTGGGCAA AACCAATCAG
TTCCGCAGCG ATCTGTATTA CCGCCTCAAC GTCGTCACGC TTGAACTGCC ACCCTTGCGT
GAGCGCCGCG AAGACATTCT GCAGTTGTTC GAACACTTCC TGCAGTTGTC GTCGTTACGC
TTCGACCGCG AACCGCCCGT GCTGGATCGG CAAACCAGCT CGAACCTGAT GAGCCATGAC
TGGCCGGGCA ATGTACGCGA ACTGCGCAAC GTGGCCGAGC GGTTTGCCCT GGGTCTGCCA
GCGTTCAAGC AGTCAGGCAC GGTCAGTGAA AACCAGAGTC TGGGGTTTGC CGAAGCGGTC
GAAGCCTTCG AACGCTCATT GCTCGGCGAC GCCTTGCAAC GCAGCGGCGG TAACCTCAGC
CAGGCCAGTC AGGAACTGGG CATGGCCAAG ACCACACTGT TCGACAAGGT CAAGAAATAC
GGGCTTTGA
 
Protein sequence
MSINSDLTVL IVEDDPHVLL GCQQALALED IASEGVSSAE EALKRIDDNF AGIVISDIRL 
PGIDGLELLS RLKARDSSLP VVLITGHGDI TMAVNAMRDG AYDFMEKPFS PERLVDVTRR
ALEQRGLARE VWALRKQLAE RDSLEGRIIG RSPAMQNLRA LIANVADTSA NVLIEGETGT
GKELVARCLH DFSRRKDSQF VALNCGGLAE SLFESEIFGH EANAFTGAGK RRIGKIEHAH
NGTLFLDEVE SMPVNLQIKL LRVLQERTLE RLGSNQSVAV DCRVIAATKS DLNALGKTNQ
FRSDLYYRLN VVTLELPPLR ERREDILQLF EHFLQLSSLR FDREPPVLDR QTSSNLMSHD
WPGNVRELRN VAERFALGLP AFKQSGTVSE NQSLGFAEAV EAFERSLLGD ALQRSGGNLS
QASQELGMAK TTLFDKVKKY GL