Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3913 |
Symbol | |
ID | 3369448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4656319 |
End bp | 4657647 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654270 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_236981 |
Protein GI | 66047140 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.289305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.253976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAA ACAGCGACCT GACCGTCCTG ATCGTCGAAG ACGATCCGCA TGTATTGCTC GGCTGCCAGC AGGCCCTCGC GCTGGAAGAC ATCGCCAGCG AGGGCGTTTC GAGCGCCGAA GAGGCCTTGA AACGTATTGA TGACAACTTC GCCGGTATCG TCATCAGCGA TATTCGCTTG CCGGGTATCG ACGGGCTGGA GTTGCTGAGC CGTCTCAAGG CACGTGACAG CAGCCTGCCG GTGGTGCTCA TCACCGGCCA TGGCGACATC ACCATGGCCG TCAACGCAAT GCGCGATGGC GCTTACGATT TCATGGAGAA ACCCTTTTCG CCTGAGCGTC TGGTCGACGT CACCCGGCGC GCACTGGAGC AACGCGGCCT GGCCCGTGAA GTGTGGGCCT TGCGCAAGCA ACTGGCCGAA CGCGATTCGC TGGAAGGCCG GATCATCGGC CGCTCCCCGG CCATGCAAAA CCTGCGTGCG TTGATTGCCA ACGTCGCCGA CACCTCGGCC AACGTACTGA TCGAAGGTGA AACCGGCACG GGCAAGGAAC TGGTCGCGCG CTGCCTGCAC GATTTCAGTC GGCGCAAGGA CAGCCAGTTC GTGGCGCTCA ACTGTGGCGG GCTGGCGGAA AGCCTGTTCG AGTCGGAAAT CTTCGGCCAT GAAGCCAACG CCTTTACCGG CGCGGGCAAG CGGCGCATCG GCAAGATCGA ACACGCGCAC AACGGCACGC TGTTTCTCGA TGAAGTGGAA AGCATGCCGG TCAATCTGCA GATCAAGCTG CTGCGCGTCC TGCAGGAGCG AACCCTCGAG CGGCTGGGTT CCAACCAGAG CGTCGCCGTG GATTGCCGGG TCATAGCGGC GACCAAATCC GATTTGAATG CCTTGGGCAA AACCAATCAG TTCCGCAGCG ATCTGTATTA CCGCCTCAAC GTCGTCACGC TTGAACTGCC ACCCTTGCGT GAGCGCCGCG AAGACATTCT GCAGTTGTTC GAACACTTCC TGCAGTTGTC GTCGTTACGC TTCGACCGCG AACCGCCCGT GCTGGATCGG CAAACCAGCT CGAACCTGAT GAGCCATGAC TGGCCGGGCA ATGTACGCGA ACTGCGCAAC GTGGCCGAGC GGTTTGCCCT GGGTCTGCCA GCGTTCAAGC AGTCAGGCAC GGTCAGTGAA AACCAGAGTC TGGGGTTTGC CGAAGCGGTC GAAGCCTTCG AACGCTCATT GCTCGGCGAC GCCTTGCAAC GCAGCGGCGG TAACCTCAGC CAGGCCAGTC AGGAACTGGG CATGGCCAAG ACCACACTGT TCGACAAGGT CAAGAAATAC GGGCTTTGA
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Protein sequence | MSINSDLTVL IVEDDPHVLL GCQQALALED IASEGVSSAE EALKRIDDNF AGIVISDIRL PGIDGLELLS RLKARDSSLP VVLITGHGDI TMAVNAMRDG AYDFMEKPFS PERLVDVTRR ALEQRGLARE VWALRKQLAE RDSLEGRIIG RSPAMQNLRA LIANVADTSA NVLIEGETGT GKELVARCLH DFSRRKDSQF VALNCGGLAE SLFESEIFGH EANAFTGAGK RRIGKIEHAH NGTLFLDEVE SMPVNLQIKL LRVLQERTLE RLGSNQSVAV DCRVIAATKS DLNALGKTNQ FRSDLYYRLN VVTLELPPLR ERREDILQLF EHFLQLSSLR FDREPPVLDR QTSSNLMSHD WPGNVRELRN VAERFALGLP AFKQSGTVSE NQSLGFAEAV EAFERSLLGD ALQRSGGNLS QASQELGMAK TTLFDKVKKY GL
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