| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3907 |
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| Symbol | glpD |
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| ID | 3369442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4649268 |
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| End bp | 4650806 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654264 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_236975 |
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| Protein GI | 66047134 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.412954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACA CCAACGTGCC AACCCCGCCC CTCTCAGAGG TTTACGACAT TGCCGTTATT
GGCGGTGGCA TCAACGGTGT CGGCATTGCA GCGGATGCCG CCGGTCGCGG CCTTTCGGTT
TTTCTGTGCG AAAAGGACGA CCTGGCCAGC CACACGTCCT CGGCCAGCAG CAAGCTGATC
CATGGTGGCT TGCGCTATCT GGAGCATTAC GAGTTCCGCC TTGTGCGTGA GGCCCTGGCA
GAACGCGAAG TGCTGCTTGC CAAAGCACCG CACATCGTCA AGCCAATGCG CTTTGTGCTG
CCTCATCGTC CGCACCTGCG TCCGGCCTGG ATGATTCGCG CCGGGATGTT CCTGTACGAC
AACCTCGGCA AGCGCGAAAA GCTGCCGGCA TCGCGAACCA TTCATTTCGG TGCGGACAGC
CCGCTCAACC CGAGCATCAC CCGCGGTTTC GAATATTCCG ACTGCTGGGT CGACGACGCG
CGTCTGGTCG TGCTCAACGC CATGTCCGCT CGTGAGAACG GTGCGCACAT TCATACTCAG
ACCCGCTGTG TCAGCGCCCG CCGTATCAAG GGCATGTGGC ATCTGCATCT GGAGCGCAGC
GACGGCAGCC TGTTTTCGAT CCATGCCAAG GCATTGGTCA ATGCGGCAGG CCCGTGGGTG
GCCAAGTTCA TCCGTGAAGA CCTCAAGCTC GACTCGGCTT ACGGCATCCG CCTGATTCAG
GGCAGCCACC TGATCGTGCC GAAACTGTAC GAAGGTGAGC ACGCGTTCAT TCTGCAGAAC
GAAGACAAGC GCATCGTGTT CACGATTCCG TACCTGGAGC ACTTCACTAT CGTCGGCACC
ACCGACCGTG AGTATCAGGG CGATCCGAAC AAGGTGGATA TCACTGAAGG CGAGATGGAT
TACGTGCTGA AAGTGGCCAA CGACCACTTC AAGAAACAGT TGAGTCGCGC AGACGTGCTC
CACACGTTCT CTGGCGTGCG CCCGCTGTGC AACGACGAGT CCGATAATCC GTCTGCCATC
ACCCGTGATT ACACGCTTTC GTTGTCAGGC GGCGCTGACG AAGCGCCGAT TCTGTCGGTG
TTCGGCGGCA AGCTGACCAC GTACCGCAAA CTGGCCGAGT CAGCGATGGC GCAGTTGGCA
CCGTTCTTCA AACAGATGAA ACCGAGCTGG ACGGCCAAGG CTGCCCTGCC GGGTGGCGAA
GACATGACCA CCGCCGAAGC GCTGGCAACA GAAATGACCC GCCGCTGCAG CTGGCTGCCA
GCCCCTATCG CCAAACGCTG GTCGATCACC TACGGCAGCC GCAGCTGGCG CTTGCTGGAG
GGTGCGCAAA GCCTGGAAGA CCTTGGTCAG CATTTGGGGG CAGGCCTGTA TACCCGCGAG
GTCGATTACC TGTGCGACCA GGAATGGGCC ACCAGCATCG AAGACATCCT GTGGCGCCGC
ACCAAGCTTG GTCTGTTCAC GACGCCTGAG GAACAGGCTG CCGTGAGCAG CTACCTGGAA
ACAGTGGTGC GCAACAAAGC CTCTTTCGAA GCGGCCTGA
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| Protein sequence | MPHTNVPTPP LSEVYDIAVI GGGINGVGIA ADAAGRGLSV FLCEKDDLAS HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGMFLYD
NLGKREKLPA SRTIHFGADS PLNPSITRGF EYSDCWVDDA RLVVLNAMSA RENGAHIHTQ
TRCVSARRIK GMWHLHLERS DGSLFSIHAK ALVNAAGPWV AKFIREDLKL DSAYGIRLIQ
GSHLIVPKLY EGEHAFILQN EDKRIVFTIP YLEHFTIVGT TDREYQGDPN KVDITEGEMD
YVLKVANDHF KKQLSRADVL HTFSGVRPLC NDESDNPSAI TRDYTLSLSG GADEAPILSV
FGGKLTTYRK LAESAMAQLA PFFKQMKPSW TAKAALPGGE DMTTAEALAT EMTRRCSWLP
APIAKRWSIT YGSRSWRLLE GAQSLEDLGQ HLGAGLYTRE VDYLCDQEWA TSIEDILWRR
TKLGLFTTPE EQAAVSSYLE TVVRNKASFE AA
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