| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3904 |
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| Symbol | |
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| ID | 3369439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4645020 |
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| End bp | 4645877 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654261 |
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| Product | major intrinsic protein |
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| Protein accession | YP_236972 |
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| Protein GI | 66047131 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCG CACTAAAACA ACCGACGCTC ACCGGGCAAT GTGTGGCTGA ATTTCTTGGC
ACCGCCCTGA TGATTTTTTT CGGCACAGGA TGCGTTGCAG CGCTCAAGGT AGCGGGAGCC
ACCTTCGGCC TTTGGGAAAT CAGCATCATC TGGGGCATTG CCGTCAGCAT GGGGATCTAC
CTCAGCGCCG GCATTTCGGG TGCCCACCTC AACCCGGCCG TCAGCATCGC GCTGAGTCTG
TTCGCCGGTT TTGAAAAACG TAAATTGCCC TTCTATATCT CGGCGCAAAT CGCAGGCGCG
TTCTGCGGAG CGGGTCTGGT GTACCTGCTG TACATCAGCC TTTTTTTCGA CTTCGAACAT
GCTCACCACA TCATTCGCGG CAGCGAGCAG AGTCTTGAAC TGGCCTCGGT GTTCTCGACG
TATCCGAACC CGGCCATTTC GGTCGGTCAG GCCTTTCTGG TCGAAGTGGT CATCACCACC
ATTCTGATGG GTGTGATCAT GGCCTTGGGC GATGACAGCA ATGGTTTGCC ACGCGGCCCG
CTGGCACCCT TGCTGATCGG CCTGCTGGTA GCCGTGATCG GCAGCTCGAT GGGCCCGCTG
ACCGGTTTCG CCATGAACCC GGCACGCGAC TTCGGTCCGA AGCTGATGAC CTTCTTCGCT
GGCTGGGGTG AAATGGCCTT CACCGGTGGT CGCGACATTC CTTATTTCCT GGTTCCGATT
TTTGCGCCCA TTCTGGGTGC CTGCCTTGGT GCTGCCGGCT ACCGCGCGCT GATTGCGCGT
CATCTGCCAA GCGCCGCTCC TGTTGAAAAT GAAAAAGAGG CTCCTGTGGT TCGCGGCAAA
GTTCAGGCTT CATCTTGA
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| Protein sequence | MSIALKQPTL TGQCVAEFLG TALMIFFGTG CVAALKVAGA TFGLWEISII WGIAVSMGIY
LSAGISGAHL NPAVSIALSL FAGFEKRKLP FYISAQIAGA FCGAGLVYLL YISLFFDFEH
AHHIIRGSEQ SLELASVFST YPNPAISVGQ AFLVEVVITT ILMGVIMALG DDSNGLPRGP
LAPLLIGLLV AVIGSSMGPL TGFAMNPARD FGPKLMTFFA GWGEMAFTGG RDIPYFLVPI
FAPILGACLG AAGYRALIAR HLPSAAPVEN EKEAPVVRGK VQASS
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