| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3880 |
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| Symbol | |
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| ID | 3369415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4620466 |
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| End bp | 4622958 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654237 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_236948 |
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| Protein GI | 66047107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.60391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAC CCACCGATTT CGCTCGACGA TGGTTTCTCG CCCGGGGCTG GAAGCCCTTT
GCGTTTCAGA AAGAGGTCTG GGCAGCGGTG AAGAATGGCG AGTCCGGTTT GCTGCATGCC
AGCACCGGCT CGGGCAAGAC CTACGCCGTG TGGTTCGCCG CGCTCAACCG CTTCGCCAAA
GCCAATACGC TCACCGCTGA CAACAAACCC CGCAAACGCA AACCGCCTGC TGAACCGCTG
AGTGTCCTGT GGATAACGCC CATGCGCGCC CTGGCCGCCG ATACCGCCCG GGCCCTTGAG
GCGCCACTGG CCGAACTGGA TATCCCTTGG TCGGTCGGCT TGCGCACCGG CGATACCAGC
GGCAGTGAAC GCGCCCGGCA GAGCCGGCGG CTGCCCTCGG CCTTGATCAC CACCCCTGAA
AGCCTGACGC TGCTGCTGAC CCGTGCCGAC GCTCAGGTCG CCTTGTCGAC GCTGAAGATG
GTGGTGGTGG ACGAATGGCA CGAGCTGATC GGCAACAAGC GTGGCGTGCA GTTGCAACTG
GCCCTTGCCC GCCTGAGGCG CTGGAATCCA CAGCTGATCG TGTGGGGCAT TTCCGCGACG
CTGGGTAATC AGCAACACGC GCAGCAGGTG CTGATCGGCG ACGGCGGCGT GACCGTGCAA
GGCAAGATCG TCAAGGACTT GCAGGTCGAT ACGCTGTTGC CGTCTTCCAT CGAACGCTTC
CCGTGGGCCG GGCACATGGG CTTGCGCATG TTGCCGCAGG TCGTCGCCGA GGTGGAAAGC
AGCGCGAGCT GTCTGGTGTT CACCAACACC CGGGCGCAGT CGGAAATATG GTATCAGGCG
CTACTGGAGG CCCGCCCCGA CTGGGCCGGG CTGATTGCCC TGCACCATGG ATCGCTGGCC
CGAGAGGTCC GCGACTGGGT CGAACGCGCG TTGAAAGAAG GCGCACTCAA GGCCGTGGTA
TGCACCTCCA GCCTGGACCT GGGCGTGGAC TTTCTGCCGG TCGAGCGCGT GTTGCAAATC
GGCTCGCCCA AAGGTGTCGC GCGCCTGATG CAGCGCGCCG GTCGTTCGGG CCACGCGCCG
GGTCGCCCTT CGCGCGTGAC GCTGGTGCCG ACCCACAGCC TGGAACTGGT CGAAGCCGCT
GCTGCACATG ACGCCGTCGA AGCTCGGATG ATCGAGCCCC GTGAGTCACC ACACCAGCCG
CTGGACGTGC TGGTCCAGCA CCTGGTCAGC ATCGCCCTGG GCGGTGGTTT TCTGCCCGAT
GAACTGCTGG GCGAAGTACG CAGCGCCTGG GCTTACCACG ACCTCAGCGA CGAGCAATGG
CAATGGGCGC TGGCGTTTGT CCGCAACGGC GGCCACTCAC TGACCGCCTA CCCCGATTAC
CGCCGCGCCG AACCCGACGA GGACGGCGTC TGGCGGGTCC CTGATGCGCG TCTTGCCAGA
CGCCACCGCA TGAGCGTGGG GACCATCGTC AGTGAGGCCA CCGTCAACCT GAAATACTGG
AAAAAAGGCG GCGGTGGTGG CTCTCTGGGC AGCGTCGAGG AAGGCTTTAT CGCCAGACTC
AAACCCGGTG ACGGCTTTCT GTTCGGCGGA CGCTTACTGG AATTGGTTCG AGTAGAAAAC
ATGACGGCCT ACGTCAAGCG CGCGACCGGC AAGAAAGCCG CCGTGCCACG CTGGAATGGC
GGTCGGATGC CGCTGTCCAG CGAACTGGCA GATGCAGTGG TGGAGAAGTT CGATGCCGCT
GCGCGGGGCC AATTCAACAG CCCGGAAATG CGCGCCATCA AACCCCTGCT GGAAGTGCAG
CAGCACTGGT CAGGGCTGCC GAGACGCGAC ACGTTGCTGG CCGAGACACT CAAATCCCGC
GAAGGCTGGC ATCTATTCCT CTACCCGTTC GCCGGCCGTC ATGTGCACCT GGGGCTGGGC
AGCCTGCTGG CCTGGCGCCT GAGCCGGCAT CGGCCGCTGA CCTTTTCCAT CGCCGTCAAC
GACTACGGGC TGGAGCTGCT CAGCGCCAGC GAGATCGACT GGTCGCAGAC GTTGCAGGCC
GAGCTGTTCA GCGAAACGGA TCTTTTACCC GATATCATCG CCAGCCTGAA CGCTGGCGAG
CTGGCCCTGC GGCGCTTTCG GGAAATCGCG CGTATCTCCG GGTTGGTGTT TTCCGGCTAC
CCTGGCGCGG CCAAGAGCAA TCGTCAGCTT CAGGCATCCA GCGGACTGTT TTTCGAGGTG
TTCAAGCAAT ACGACGCTGA CAACATGCTG CTGACTCAGG CCGAACAGGA GGTCCTGCGT
CAGGAACTGG ACCTGCAGCG CCTGGAGCTG ACGTTGCGCC AGATCAACAG CCGCACGCTG
GACCTGCACG CTATAAAACG CGCGACCCCG CTGGCCTTTC CACTGCTGGT CGAACGCTTT
CGCGAAAGCC TCAGTTCGGA GAAACTTGCC GACCGCATCG CGCGCATGGT TCGCGATCTG
GAGAAAGCCG CTGGCCCGGA GCCTGAACGA TGA
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| Protein sequence | MSRPTDFARR WFLARGWKPF AFQKEVWAAV KNGESGLLHA STGSGKTYAV WFAALNRFAK
ANTLTADNKP RKRKPPAEPL SVLWITPMRA LAADTARALE APLAELDIPW SVGLRTGDTS
GSERARQSRR LPSALITTPE SLTLLLTRAD AQVALSTLKM VVVDEWHELI GNKRGVQLQL
ALARLRRWNP QLIVWGISAT LGNQQHAQQV LIGDGGVTVQ GKIVKDLQVD TLLPSSIERF
PWAGHMGLRM LPQVVAEVES SASCLVFTNT RAQSEIWYQA LLEARPDWAG LIALHHGSLA
REVRDWVERA LKEGALKAVV CTSSLDLGVD FLPVERVLQI GSPKGVARLM QRAGRSGHAP
GRPSRVTLVP THSLELVEAA AAHDAVEARM IEPRESPHQP LDVLVQHLVS IALGGGFLPD
ELLGEVRSAW AYHDLSDEQW QWALAFVRNG GHSLTAYPDY RRAEPDEDGV WRVPDARLAR
RHRMSVGTIV SEATVNLKYW KKGGGGGSLG SVEEGFIARL KPGDGFLFGG RLLELVRVEN
MTAYVKRATG KKAAVPRWNG GRMPLSSELA DAVVEKFDAA ARGQFNSPEM RAIKPLLEVQ
QHWSGLPRRD TLLAETLKSR EGWHLFLYPF AGRHVHLGLG SLLAWRLSRH RPLTFSIAVN
DYGLELLSAS EIDWSQTLQA ELFSETDLLP DIIASLNAGE LALRRFREIA RISGLVFSGY
PGAAKSNRQL QASSGLFFEV FKQYDADNML LTQAEQEVLR QELDLQRLEL TLRQINSRTL
DLHAIKRATP LAFPLLVERF RESLSSEKLA DRIARMVRDL EKAAGPEPER
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