Gene Psyr_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3850 
Symbol 
ID3369385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4588981 
End bp4589661 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID637654207 
Productputative lipoprotein 
Protein accessionYP_236918 
Protein GI66047077 
COG category[S] Function unknown 
COG ID[COG3650] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCTG CCCGTTCCGT CCTCGTATTT GCTCTTCTAC CGCTGTTTGC CGGGTGTCAG 
TTGCTCGGTA AACAGAACGA GGAACCGAAG GTTTCCACGG CGGGCATGCT CCGCATGCAG
GGCGATCTGA CCGGGGAGAA CGGCCAGTTG CTGTTCAAGC CGTGTAACGA GCAGCGTCGC
TACGTGGTCA AGGATCGCGG CAACACCGGC ATTCTGCAGG AGGCGGCCTC GCTGGCGGAC
AGCAAGGGCA CGGTGTTTGC CGATCTGCGC GGCAGCTTTG CCGCGAGCAA GGCGGCCAAC
AGTGACGGTC AGCTGGACCT GCATCAGCTG TACCGCGTCG AACGTCCAGG CCAGGCCTGT
GAAGACCTCA ACTTCAAACG CCTGACATTG CACGTCAATG GCAACAAACC CGCCTGGAAC
GTCAATGTCA GCGGCAAGGG CATGGTTCTG GAGCGCGAGG GCGTCGCGCC ACTGGCGTTG
CCCTACGTGG AAGAGAAGCT GCCGGACGGC AGTTTCAGCG TCAGCAGCGA AGCCAACAAC
CAGCGTATCG AGATATGGGT CGCACCACAG CGCTGCGTCG ACAGCGTCGA CGGCTCGGTG
CAACACCTCA CCGCAGAGCT GCGCATCAAC GGCCAGGCCC AGCGTGGCTG CGGTTATTAC
GGCGGTTCAC GCGACGACTG A
 
Protein sequence
MFAARSVLVF ALLPLFAGCQ LLGKQNEEPK VSTAGMLRMQ GDLTGENGQL LFKPCNEQRR 
YVVKDRGNTG ILQEAASLAD SKGTVFADLR GSFAASKAAN SDGQLDLHQL YRVERPGQAC
EDLNFKRLTL HVNGNKPAWN VNVSGKGMVL EREGVAPLAL PYVEEKLPDG SFSVSSEANN
QRIEIWVAPQ RCVDSVDGSV QHLTAELRIN GQAQRGCGYY GGSRDD