Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3850 |
Symbol | |
ID | 3369385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4588981 |
End bp | 4589661 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654207 |
Product | putative lipoprotein |
Protein accession | YP_236918 |
Protein GI | 66047077 |
COG category | [S] Function unknown |
COG ID | [COG3650] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCTG CCCGTTCCGT CCTCGTATTT GCTCTTCTAC CGCTGTTTGC CGGGTGTCAG TTGCTCGGTA AACAGAACGA GGAACCGAAG GTTTCCACGG CGGGCATGCT CCGCATGCAG GGCGATCTGA CCGGGGAGAA CGGCCAGTTG CTGTTCAAGC CGTGTAACGA GCAGCGTCGC TACGTGGTCA AGGATCGCGG CAACACCGGC ATTCTGCAGG AGGCGGCCTC GCTGGCGGAC AGCAAGGGCA CGGTGTTTGC CGATCTGCGC GGCAGCTTTG CCGCGAGCAA GGCGGCCAAC AGTGACGGTC AGCTGGACCT GCATCAGCTG TACCGCGTCG AACGTCCAGG CCAGGCCTGT GAAGACCTCA ACTTCAAACG CCTGACATTG CACGTCAATG GCAACAAACC CGCCTGGAAC GTCAATGTCA GCGGCAAGGG CATGGTTCTG GAGCGCGAGG GCGTCGCGCC ACTGGCGTTG CCCTACGTGG AAGAGAAGCT GCCGGACGGC AGTTTCAGCG TCAGCAGCGA AGCCAACAAC CAGCGTATCG AGATATGGGT CGCACCACAG CGCTGCGTCG ACAGCGTCGA CGGCTCGGTG CAACACCTCA CCGCAGAGCT GCGCATCAAC GGCCAGGCCC AGCGTGGCTG CGGTTATTAC GGCGGTTCAC GCGACGACTG A
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Protein sequence | MFAARSVLVF ALLPLFAGCQ LLGKQNEEPK VSTAGMLRMQ GDLTGENGQL LFKPCNEQRR YVVKDRGNTG ILQEAASLAD SKGTVFADLR GSFAASKAAN SDGQLDLHQL YRVERPGQAC EDLNFKRLTL HVNGNKPAWN VNVSGKGMVL EREGVAPLAL PYVEEKLPDG SFSVSSEANN QRIEIWVAPQ RCVDSVDGSV QHLTAELRIN GQAQRGCGYY GGSRDD
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