Gene Psyr_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3849 
Symbol 
ID3369384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4588023 
End bp4588724 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID637654206 
ProductABC transporter 
Protein accessionYP_236917 
Protein GI66047076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGT TCGAAAACGT TTCCACCTTC TACGGCAAGA TCCAGGCGCT GCACAGCGTC 
AACGTGGAAG TACGCCAGGG TGAAATTGTC ACCCTGATCG GCGCCAACGG CGCGGGCAAG
TCCACCCTGC TGATGACCCT GTGCGGCTCG CCGCGCGCCC ACAGCGGCAG TATTCGCTAC
ATGGGCGAGG AACTGGTCGG GCTGGAGTCG TCGATCATCA TGCGCAAGAG CATTGCCGTG
GTGCCGGAAG GCCGCCGGGT ATTTGCGCGC CTGACCGTTG AAGAGAACCT GGCAATGGGC
GGTTTCTTCA CGGAAAAGGA GGATTATCAG GAACAGATGG ACAAGGTCCT GCACCTTTTT
CCCCGCCTCA AGGAACGCTT CAATCAGCGC GGCGGCACCA TGTCCGGTGG CGAACAGCAG
ATGCTGGCCA TCGGTCGCGC ACTGATGAGC AAGCCCAAGC TGCTGTTGCT GGACGAGCCT
TCACTGGGTC TGGCGCCGAT CATCATCCAG CAGATTTTCG AGATCGTCGA ACAGCTGCGC
CGCGATGGCG TGACGGTGTT TCTGGTCGAA CAGAACGCCA ACCAGGCCCT GAAAGTCGCT
GATCGCGCCT ACGTACTGGA AAACGGCCGC GTGGTCATGC AAGGCACAGG CGAAGAACTG
CTGGTCGATC CGAAAGTGCG GGACGCGTAT CTGGGCGGCT AA
 
Protein sequence
MLQFENVSTF YGKIQALHSV NVEVRQGEIV TLIGANGAGK STLLMTLCGS PRAHSGSIRY 
MGEELVGLES SIIMRKSIAV VPEGRRVFAR LTVEENLAMG GFFTEKEDYQ EQMDKVLHLF
PRLKERFNQR GGTMSGGEQQ MLAIGRALMS KPKLLLLDEP SLGLAPIIIQ QIFEIVEQLR
RDGVTVFLVE QNANQALKVA DRAYVLENGR VVMQGTGEEL LVDPKVRDAY LGG