Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3849 |
Symbol | |
ID | 3369384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4588023 |
End bp | 4588724 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654206 |
Product | ABC transporter |
Protein accession | YP_236917 |
Protein GI | 66047076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGT TCGAAAACGT TTCCACCTTC TACGGCAAGA TCCAGGCGCT GCACAGCGTC AACGTGGAAG TACGCCAGGG TGAAATTGTC ACCCTGATCG GCGCCAACGG CGCGGGCAAG TCCACCCTGC TGATGACCCT GTGCGGCTCG CCGCGCGCCC ACAGCGGCAG TATTCGCTAC ATGGGCGAGG AACTGGTCGG GCTGGAGTCG TCGATCATCA TGCGCAAGAG CATTGCCGTG GTGCCGGAAG GCCGCCGGGT ATTTGCGCGC CTGACCGTTG AAGAGAACCT GGCAATGGGC GGTTTCTTCA CGGAAAAGGA GGATTATCAG GAACAGATGG ACAAGGTCCT GCACCTTTTT CCCCGCCTCA AGGAACGCTT CAATCAGCGC GGCGGCACCA TGTCCGGTGG CGAACAGCAG ATGCTGGCCA TCGGTCGCGC ACTGATGAGC AAGCCCAAGC TGCTGTTGCT GGACGAGCCT TCACTGGGTC TGGCGCCGAT CATCATCCAG CAGATTTTCG AGATCGTCGA ACAGCTGCGC CGCGATGGCG TGACGGTGTT TCTGGTCGAA CAGAACGCCA ACCAGGCCCT GAAAGTCGCT GATCGCGCCT ACGTACTGGA AAACGGCCGC GTGGTCATGC AAGGCACAGG CGAAGAACTG CTGGTCGATC CGAAAGTGCG GGACGCGTAT CTGGGCGGCT AA
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Protein sequence | MLQFENVSTF YGKIQALHSV NVEVRQGEIV TLIGANGAGK STLLMTLCGS PRAHSGSIRY MGEELVGLES SIIMRKSIAV VPEGRRVFAR LTVEENLAMG GFFTEKEDYQ EQMDKVLHLF PRLKERFNQR GGTMSGGEQQ MLAIGRALMS KPKLLLLDEP SLGLAPIIIQ QIFEIVEQLR RDGVTVFLVE QNANQALKVA DRAYVLENGR VVMQGTGEEL LVDPKVRDAY LGG
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