Gene Psyr_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3848 
SymbollivG 
ID3369383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4587255 
End bp4588022 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID637654205 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_236916 
Protein GI66047075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0319236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC CATTACTGCA AGCCACCGGC TTGAGCATGC GTTTTGGCGG CCTGCTGGCG 
GTCAATGGCG TTGCCCTGAC CGTCAATCAG GGGCAGGTCG TATCGATGAT CGGCCCCAAT
GGCGCAGGCA AGACCACAGT CTTCAACTGC CTGACCGGGT TCTACCGGCC GAGCGCGGGC
ACGATTCTGC TGGACGGTGA GCCGATCCAG GGCCTGGCTG GTCACCAGAT CGCGCGCAAG
GGCGTGGTGC GTACCTTCCA GAACGTGCGC CTGTTCAAGG ACATGACCGC CGTGGAAAAC
CTGCTGGTTG CCCAGCACCG GCATTTGAAC ACCAACTTCC TGTCCGGCCT GTTCAAGACG
CCCGCGTTTC GCCGCAGCGA ACGTGAAGCC ATGGACTACG CCGAGCACTG GCTTGAGGCG
GTCAACCTGC GTGAATTCGC CAATCGCCCT GCCGGGACGC TGGCCTATGG TCAGCAACGC
CGCCTGGAAA TCGCCCGCTG CATGATGACG CGTCCGCGCA TTCTGATGCT CGACGAACCG
GCAGCGGGTC TGAACCCCAG GGAAACCGAT GATCTGAAAG CGCTGATCGG CGTGTTGCGC
AGCGAGCACA ACGCGACGGT CCTGCTGATC GAGCATGACA TGAAACTGGT GATGAGCATT
TCCGACCACA TTGTGGTGAT CAACCAGGGC ACGCCTCTGG CCGATGGCAC GCCGGAGCAG
ATTCGTGACA ATCCCGATGT GATCAAAGCC TACCTGGGGG AAGCGTAA
 
Protein sequence
MSRPLLQATG LSMRFGGLLA VNGVALTVNQ GQVVSMIGPN GAGKTTVFNC LTGFYRPSAG 
TILLDGEPIQ GLAGHQIARK GVVRTFQNVR LFKDMTAVEN LLVAQHRHLN TNFLSGLFKT
PAFRRSEREA MDYAEHWLEA VNLREFANRP AGTLAYGQQR RLEIARCMMT RPRILMLDEP
AAGLNPRETD DLKALIGVLR SEHNATVLLI EHDMKLVMSI SDHIVVINQG TPLADGTPEQ
IRDNPDVIKA YLGEA