| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3839 |
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| Symbol | |
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| ID | 3369374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4574582 |
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| End bp | 4576213 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654196 |
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| Product | type III helper protein HopAK1 |
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| Protein accession | YP_236907 |
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| Protein GI | 66047066 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGA TCAACAGAAA CTACTACCCC GTCTCCGGGA TTCCTGCGCA GGACGCCCCG
GCACAGACCG ATCAACTGCC GCCTCAAGGC CAGGGCATCA AGCCGGGCCA CAATAGCAAC
CTGATCGACT TCGGCCTGAC ACAGCAGGCC AATGGCCCGC ACTCCTCGCT GAATACCCTG
GGCTCCAGAG TCCAGCCGAC TGACACGAAC ACGTCTTCAA ATATGCCGGG TGGCAACGGT
GAGCAGGTAC TGAACAAACT TGTGCAAGCG ATCCGCAACA TCCTCAACAA CCTGCTCTCG
CTGCTGGAAG GAAATCTACA CAACGGCTCT GGGCCTGCAC AGCCTCAACG CGATCAGACG
CCGACGCTCG CTCAATCGCC CTCTTCCGCC TCCCCTTCCT CGTCGCCGCC TTCAACACCT
CAGGGCAACG CAGAAAAACC CTTTGTGGTG CAGAACGATC ACCCTTCAGA AAAACCTGTA
TCACTGCAAA AGAATACAGA GCCGACGTCC GCTGCGCCGT CACAAACAGC ACCCCGGACG
ACCGAGCGAA GCAGTGCCAC CCCAGACAAG ACACCCGCCA GACCCGATGC GGTAAACCCG
GCAGTGGTCC ATGACCTTGC GCTGCCGAAA ACTTCGACGG ACACCACCGC CAAACCCGAT
AACACGGTTA ACGCAGCCAA AACCGCGACC CCGGCCGCGC ATGGCCAGGG CGCGGACATG
TCCGGCATCA TGGGTTTCGC CAAAGAGGCC AACACCACCG GCGGTAACGG CGGCGAAGTC
GTCACGGTCA ATACCGTGGC GGACCTCAAG AAGTACATGG AGGACGACAA AGCCCGCACC
GTCAAACTGG GGGCCAACCT GTCTGCCGAC AGCAAGGTGA CCATCAACTT TGGCGCCAAC
AAGACCCTGC TGGGCACCGA CAAGGGCAAC AGCCTGCACA ACATCTACCT GGCCAGCGGC
AAGACCGCCA GCAATGACAT CTTCCAGAAC CTGAACTTCG ACCACGACAG CCGTTATCGC
GAAAACGGTG ACATGCAGAT GTTCATCAGC AGCGGTCAGA AATACTGGAT CGACCACAAC
ACCTATTCAG GCACCAAGGA TCAGAACGCC AAAGGCCTGG ACAAGCTGCT GTATGTCGGC
GGGACGGCAG ACAACGTCAG CCTGACCAAC TCTAAATTCC AGAACAACGA ATACGGCGTG
ATTCTTGGTC AGCCGGACGA CTCCGCTCAA GCCAAGGCCG AGTACAAGGG CTACCCGCGC
ATGACCATCG CCAACAATGT GTTCAGCAAC CTTGATGTTC GCGCACCCGG CCTGATGCGT
CATGGGCAAT TTGATGTGCT CAACAACTCG ATCGACAACT TCCATCTTGG CTTCACCGCG
ACGGGGGATG CGACCATCCT TTCGCAGGCC AACTATTTCG CGAAAGGCGT GGATGTTTCC
GACAAGGCCA GCAACTCCGG CGTGCTGGAT GACTATGGCG ATGCGCACTT CAAGGACATC
GGCAGCAATG TCAGCTTCAC CCAGAAGTCA GCGGTGACCG CGTGGACGCC GAGCTATCAG
CGCGACATCA AGACCGCCGA AGCCGCCAGA GCCTATGACC AGGCCAATGC CGGCGCCAAA
ACCGTGAGCT GA
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| Protein sequence | MNTINRNYYP VSGIPAQDAP AQTDQLPPQG QGIKPGHNSN LIDFGLTQQA NGPHSSLNTL
GSRVQPTDTN TSSNMPGGNG EQVLNKLVQA IRNILNNLLS LLEGNLHNGS GPAQPQRDQT
PTLAQSPSSA SPSSSPPSTP QGNAEKPFVV QNDHPSEKPV SLQKNTEPTS AAPSQTAPRT
TERSSATPDK TPARPDAVNP AVVHDLALPK TSTDTTAKPD NTVNAAKTAT PAAHGQGADM
SGIMGFAKEA NTTGGNGGEV VTVNTVADLK KYMEDDKART VKLGANLSAD SKVTINFGAN
KTLLGTDKGN SLHNIYLASG KTASNDIFQN LNFDHDSRYR ENGDMQMFIS SGQKYWIDHN
TYSGTKDQNA KGLDKLLYVG GTADNVSLTN SKFQNNEYGV ILGQPDDSAQ AKAEYKGYPR
MTIANNVFSN LDVRAPGLMR HGQFDVLNNS IDNFHLGFTA TGDATILSQA NYFAKGVDVS
DKASNSGVLD DYGDAHFKDI GSNVSFTQKS AVTAWTPSYQ RDIKTAEAAR AYDQANAGAK
TVS
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