| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3831 |
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| Symbol | |
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| ID | 3369366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4564908 |
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| End bp | 4568819 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654188 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_236899 |
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| Protein GI | 66047058 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.894143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AATCGCCCTC TATCGACCAA CTTCTGAAAA ACCTCGACCA CGCGATGATC
AGCGAACGTC ATCGTCTGCG CCGTCAGTTG CACGATCTGC GCAAAAAACC CGACGAGGCG
AAGCTGGCGC AGTGGGTTGC GCGGGTGCAG GCATCCTGCG CGCAGGTCAC GGCGCGGCGC
GAGAGTGTGC CGGCGATCCG TTATGACGAT AACCTGCCCA TCGCGGCCAA GCGTGACGAG
ATCAAGGAGG CGCTGCTCAA GCACCAGGTG CTGATCATTG CCGGCGAGAC CGGCTCCGGG
AAAACCACCC AGTTGCCGAA GATCTGCCTG GAAATCGGTC GCGGTCAGCA CGGTCTGATC
GGTCATACCC AGCCGCGCCG GATCGCTGCG CGCAGCGTGG CCAGCCGGGT TGCCGAGGAA
ATCGGCACGC CCCTCGGTGC GCTGGTCGGC TATCAAGTGC GTTTCGAGGA CCAGAGCGAC
AGCAACACCC TGATCAAGCT GATGACCGAC GGGATTCTGC TGGCTGAAAC CCAGCACGAC
CGCTTTCTTG AGCGCTACGA CACGATCATC GTCGACGAAG CCCACGAACG CAGCCTGAAC
ATCGATTTCC TGCTGGGTTA CCTGAAAACC CTGCTGCCGC GCCGTCCGGA CCTGAAGGTC
ATCATCACCT CCGCGACCAT CGACCTGCAG CGCTTTTCCG AGCACTTCAA CGATGCGCCG
GTGATCGAAG TCTCCGGGCG TACCTTCCCC GTGGATGTCT GGTATCGCCC GCTGACCAGC
GAGCAGGACG AAGACGGCAA CAGCGTCGAA GAGGACCTGA CCGTCGATCA GGCGATTCTG
GCCACGCTGG ACGAACTGGC GGCCTTTGAG CGCAGCGAGC GCAAGAGCCC GGGTGATGTG
TTGGTGTTCC TGCCCGGCGA GCGCGAGATC CGTGATGCCG CCGAGGTGCT GCGCAAGGCG
CAACTCAAGC ACACCGAGAT TCTGCCGCTC TACGCGCGCC TCTCGCCGGC CGAGCAGCAG
CGTATCTTTC AATCGCATCC CGGTCGGCGT GTGGTGCTGG CTACCAACGT CGCTGAAACT
TCGCTGACCG TGCCGGGCAT CCGCTATGTG ATCGACACCG GTACGGCGCG CATCAGTCGC
TACAGCTATC GCGCCAAGGT CCAGCGCCTG CCGATCGAGG CGGTGTCGCA GGCCAGTGCC
AACCAGCGCA AGGGCCGTTG CGGGCGGGTC GAGCCCGGCC TGTGTGTGCG TCTCTATAGC
GAAGAGGATT TCAACGGTCG GCCGGAGTTT ACCGACCCCG AGATCCTGCG CACCAACCTG
GCCGCAGTCA TCCTGCAGAT GCTGCACTTG CGCCTGGGCG AGATCACCGA CTTCCCGTTC
ATCGAGCCGC CGGACGGCAA GGCAATCAGC GACGGCTTCA ACCTGTTGCA GGAGCTTTCG
GCGGTCAATC GCGAAAATCA GCTGACCCCG CTGGGCCGCC AACTGGCGCG TCTGCCGGTT
GACCCGCGTA TGGGTCGCAT GCTGCTGGAA GCGGCGAAGC AGGGCAGTCT GCAGGAAGTG
CTGATCGTCG CCAGCGCCAT GTCGGTACAG GACGTGCGCG AGCGCCCGCC CGAGCGTCAG
CAGGCTGCGG ATCAGGCCCA CGCGCAATGG AAGGACGCCG ACTCGGACTT CGCCGGGATG
GTCAATCTAT GGCGCGGCTT CGAAGAGCAG CGCCAGACCC TGACCGCCAG CCCGCTGCGT
AACTGGTGCC GGCGCAATTT TCTGAATTAC CTGCGCCTGC GTGAATGGCG CGATTCCCAT
CGGCAATTGA GCCTGATCTG TCGCGACCTG CAACTGACGG TCAACAAGGA GCCGGCCGAT
TACCCGAAGT TTCACAAGGC CATTCTTTCC GGCCTGCTGA GTCAGATCGG GCAAAAGACC
GACGAGGGCG ATTACCTCGG CGCACGGCAG CGGCGCTTCT GGATTCACCC GTCCTCCGGG
TTGGGCAAGA AACGTCCGCA GTGGTTGATG ACTGCCGAGC TGGTAGAGAC CACCAAACTG
TACGCGCGCA TGGTTGCCAA GATTGATTCG GACTGGATCG AGCCGCTGGC CGGCCACCTG
ATCAAGAAAA ATCACTTCGA GCCGCACTGG GAGAAGAAGC GCGGACAGGT CGTGGCGTTC
GAACAGATCA CGCTGTTCGG CCTGATCGTG GTGGGCCGTC GCCCGGTGCA TTTCGGGCCG
ATCGACCCGG TGGTTTCACG CGAGCTGTTC ATTCGTGAAG GCCTGGTGCG TGGCGATATC
CTGTCGCGGG CCAAGTGCCT GAGCGCCAAT ACCCGTTTGC TGGAACAGCT CGACGAACTG
GAAGCCAAGG CTCGGCGTCG CGATATTCTG GCTGACGAAG ACACCTTGTA CAGCTTCTAT
GAAGCACGTA TTCCGGCCGA GATTCATCAG ACGGCCACGT TCGACAGCTG GTACAAGACC
GAAAGCCAGA AGAATCCGCA GCTGCTGATC ATGCGCGAAG AGGACGTGCT GGCCCGCGAG
GCCAGCGAAG TCACCGCCGC GCAATATCCG GACACCTTGC GTCTGGGCGA CCTGAGCCTG
TCGCTGAGCT ACCACTTCGA ACCCAATCAC CCGCGTGACG GCGTGACCTT GCGTGTTCCC
GCGCCGTTGT TGCTGTCGCT GCCTGCCGAG CGTCTTGAGT GGCTGGTGCC GGGGTTGCTC
GAGAGCAAAT GCATCGCGCT GGTCCGCAAC CTGCCCAAGG CGGTACGCAA GAACTTTGTG
CCGGTCCCGG ATTTCATCAA GGCGGCGTTG CAGCGCATCA CCTTCGGCGA GGGCTCGTTG
CCTCAGGCGC TGGGCCGTGA ACTGCTGCGC ATGACCGGCG TGCGGGTCAG CGACGAGGCC
TGGGCCGAGG CGGCGCAGCA GCTTGAGGGC CACCTGAAGA TGAACCTGGA AATCGTCGAT
GGCAGCGGCA AGTTTCTCGG TGAGGGACGT GATCTGGCTG AGCTGACCGC GCGCTTTGCC
GAGGCGAGCC AGGCCGCGCT GGCCGTGCCG CAAACCGCAA AGAGCCAGCA ACCGGTGCAG
GCCAAGGCCT TTGCTGCGGT GGCGCAGAAA ACCCAGCAGA ACATCGCCGG GCTGTCGATG
ACGGTTTATC CGGCGCTGGT CGAAGAGGGC GGCGCGGTCA AGGAAGGCCG GTTCTCGACC
CAGGCCGAGG CCGAGTATCA GCATCGCCGT GCCTTGCAGC GTTTGCTGTT GCAGCAGTTG
GCCGAACCCG CCAAGTTTCT GCGCAACAAA TTGCCGGGGC AGACCGAGCT GGCCTTGCTG
CATCGCGAAC TGGGGCGCAT CGATGCGTTG ATCGAAGACA TCCTGCTGGC CAGCCTCGAC
AGTTGCGTGC TGGAAGGTGA GGCCGAATTG CCGCGCGACG GTGCCGGTCT GTTGTCACTG
GCTGAGCGCA AGCGCGCCGA CTGGACCGAG CATGCCGAAC GGCTCGCGAA GCTGACGCTG
GAAATCCTCA AGCTGTGGCA CGGTCTGCAA AAGCGCTTCA AAGGCAAGAT CGACCTTTCC
CAGGCCGTTG CACTCAACGA CATCAAGGCG CAACTGAGCA AGCTGGTGTA CCCCGGATTC
GTTCGCGAGA CCCCGGCGGT ATGGCTCAAG GAACTGCCGC GTTACCTCAA GGCCATCGAG
ATGCGCCTGG AAAAACTCCC GGCTCAGGTG CAGAAGGACC GGGTGTGGAG CATCGAGCTT
GCAGGTCTGT GGGCGCAATA CCAGGCGCGC GCCGACAAGC ATGCTCAAGA GGGCAAGCGC
GACCCGGAAC TGGCGCTGTA CCGCTGGTGG ATGGAGGAAT ACCGCGTCTC GCTGTTCGCC
CAGCAACTGG GCACAAAAAT GCCGGTGTCG GACAAACGGT TGAGCAAGCA GTGGGGTCAG
GTGGAGAGCT GA
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| Protein sequence | MTDESPSIDQ LLKNLDHAMI SERHRLRRQL HDLRKKPDEA KLAQWVARVQ ASCAQVTARR
ESVPAIRYDD NLPIAAKRDE IKEALLKHQV LIIAGETGSG KTTQLPKICL EIGRGQHGLI
GHTQPRRIAA RSVASRVAEE IGTPLGALVG YQVRFEDQSD SNTLIKLMTD GILLAETQHD
RFLERYDTII VDEAHERSLN IDFLLGYLKT LLPRRPDLKV IITSATIDLQ RFSEHFNDAP
VIEVSGRTFP VDVWYRPLTS EQDEDGNSVE EDLTVDQAIL ATLDELAAFE RSERKSPGDV
LVFLPGEREI RDAAEVLRKA QLKHTEILPL YARLSPAEQQ RIFQSHPGRR VVLATNVAET
SLTVPGIRYV IDTGTARISR YSYRAKVQRL PIEAVSQASA NQRKGRCGRV EPGLCVRLYS
EEDFNGRPEF TDPEILRTNL AAVILQMLHL RLGEITDFPF IEPPDGKAIS DGFNLLQELS
AVNRENQLTP LGRQLARLPV DPRMGRMLLE AAKQGSLQEV LIVASAMSVQ DVRERPPERQ
QAADQAHAQW KDADSDFAGM VNLWRGFEEQ RQTLTASPLR NWCRRNFLNY LRLREWRDSH
RQLSLICRDL QLTVNKEPAD YPKFHKAILS GLLSQIGQKT DEGDYLGARQ RRFWIHPSSG
LGKKRPQWLM TAELVETTKL YARMVAKIDS DWIEPLAGHL IKKNHFEPHW EKKRGQVVAF
EQITLFGLIV VGRRPVHFGP IDPVVSRELF IREGLVRGDI LSRAKCLSAN TRLLEQLDEL
EAKARRRDIL ADEDTLYSFY EARIPAEIHQ TATFDSWYKT ESQKNPQLLI MREEDVLARE
ASEVTAAQYP DTLRLGDLSL SLSYHFEPNH PRDGVTLRVP APLLLSLPAE RLEWLVPGLL
ESKCIALVRN LPKAVRKNFV PVPDFIKAAL QRITFGEGSL PQALGRELLR MTGVRVSDEA
WAEAAQQLEG HLKMNLEIVD GSGKFLGEGR DLAELTARFA EASQAALAVP QTAKSQQPVQ
AKAFAAVAQK TQQNIAGLSM TVYPALVEEG GAVKEGRFST QAEAEYQHRR ALQRLLLQQL
AEPAKFLRNK LPGQTELALL HRELGRIDAL IEDILLASLD SCVLEGEAEL PRDGAGLLSL
AERKRADWTE HAERLAKLTL EILKLWHGLQ KRFKGKIDLS QAVALNDIKA QLSKLVYPGF
VRETPAVWLK ELPRYLKAIE MRLEKLPAQV QKDRVWSIEL AGLWAQYQAR ADKHAQEGKR
DPELALYRWW MEEYRVSLFA QQLGTKMPVS DKRLSKQWGQ VES
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