| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3829 |
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| Symbol | |
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| ID | 3369364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4558531 |
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| End bp | 4563426 |
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| Gene Length | 4896 bp |
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| Protein Length | 1631 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654186 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_236897 |
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| Protein GI | 66047056 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0683534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCC TCAGATACAA CCCTTTTGAA ACCATAGAAT CGTCCGTTGC ACACGCCTCT
GTAACGCCTC GAGCGCAGGA CTCGGCGCCG TTCGAAGCGG AGCACGCCAA CAGCGAATTC
ATCAGGCTCA ACTTGCCAGA CTGGTATGTG GGTGCGCCAA CAGTATTGCG CCAGACACTG
CATGCCAGCC AGCAAAGCGC ACGGCGTTAC GCGCAGGCGC TGGAGCCAGT GCGCGCCCGC
CTGTTATCGG CGCAGCAATT TGCAGCCCCC TTGCTGTCGA AAGCGTTTGT CGAACGTTTC
CAGCTCGACC TCGACGTTGA AGCCTTTCAA CTGATGACCT GGCGCTACGA CAGCACCTGG
AACCCGGCTC CGCTCGAGCA GACTTTGCTT CAGGCAGCCT TGCAGAACTT CGCTCCCAGC
AACAGAAGCC GCTTCGATCC CTACTCGGCA ATCCTGCGTA CAGGGGGCCT GCGTTACTGG
CTGATCGACA GCGCCGAACG CCGCTACAAG GTGGAATACC GCGACCGCCA GGCGATCGAT
CTTGAGCAGT TCGCTGATTT TTGCCATGAA CTGGATCTGG GCCGTCAGTA TCAGACCCAC
CTGGACAGCG TGTTCAAGCC GCCAGGCCCG GCTGCGCAAG CGGTTGCCAG CGCGTTCATG
GACAGCGAGC GGGCCGCCGT CGAGGTGCTT GCGCATATCG CCATGATGAA AGGCGATATC
ACTGACGCGG CGTACCAGAC CCTGCTGGAC ATGGTGAAGT CCGTTGACCA GCCGCGCTGG
GATGGCAAGG GCGTGCGCTA TTGCCAGCTG CACATGCTCG ATACCTACAC GTTTTCAGGC
TCGCTGTTAC AGGGTGCCTT ATTGATACAG CAGGACGGCG CCAAGCCCGA TGACGGTCCT
TGTCTGGTCT ACCTGCCTGC CGAGCCTGCG CATCCGGTCA AGCAGTTCGC GTCGCTGCGG
GCCTTCAACG CCTGGCTGGT GACGGCGTTG GACAGCAAGC ACTACCGACG CTACTTCAGT
CGTTTCGTCA GTCTCGGCCA GGCTCCGGCA TTTTTTGCCA AACTGGATGC GCGGCTGTAT
CCCGCCGGGG ATCGCACGCT GGACCCCTAC GCCGACCTGG TCGTGCAGGC ACAGCCATTC
TCGAAACCAC CGTTCGAGCG GCTGTACGAG CAGTTGCTGG CCAAAACCTA TGACGACTCA
AAGGTAATCG CGGTGCCATC CGCACAGGTC GACCAGCAGG CTCACGATGC ACTGATCGAA
AGCCTTGAAA ACAACGGCAT GAACCTGCTC AACGTGGCCG GGTTCTTTGT GCCGGTGCTG
GGTGAAATCA TGTCGGTGGT CGCCCTTTAT CAGCTTGCCA GCGAAGCGTT CGTTGCTTAC
GAAGACTGGA AGCACGATGA AGTCGAAGAC GCCATGCAAC ATGTCTACGA CATCGGCGAA
AACGTTGCAC AGATGCTGGT GGCAGGCGGC GTCGTGGCTG CGGTGAACGG GCTGCAACCC
TCGATGTTCA TCGAAAGTCT GGTGCAAAGG CGTGTCGATG GGGCGGTGCG CCTCGGCAAG
CCGAGCATCG ATGCCTATGC CCATACGGTC TCCCTGCCCG ACAACCTGAG CAGCAACGCC
CTTGGGCTTT ATGAGCACGA CGGCAAGACC TGGCTGCCAC TGGACGGCAA ACTGTATTGC
GTCGAGTCCG ATGCAGACGG CAGCCAATGG CGCGTCAGGC ATCCGGTGAA TGAGCGTTCG
TACGCGCCAA GGCTCAAGCA CAACGGTGCT GGCGCATGGC GCCATGAATG GGAAAACCCC
ATGGGGTGGG ACGAGGTAAC GGCGTTCAGG CGCCTGAACC CGACGTGTCA TGCGCTGCCG
GAAGAAGACA TTCACAAAGT CCTGCACATT ACCGGCGCCA ACGAGGCCTT GCTGCGTCAG
ATACATGTCG AAAACCTCCG GCCTCCGGCC TTGCTGAAAG ACGCCATTCA GCGCGTTGCA
ACAGAACGGC AGTTGCACGT CTGTATCGAA GCCCTGAAGG CCGATGATGT GCCGCAGGTT
CATGTTGCTC ATCTTGGGCC GTGGCTGAAA CTGCTGGTGT CGTCACCACG CTGGCATGAG
ACCCGCGGCC TGTTACTGCT CGACGCGCAA GGGGCGCTGC TGGAAGCGTG GAACGCGGGA
TCGCAGATGA CGCTGTCGTC CCATGTCGCC GGGCCGACCG GGCACCTCAG TCAGGTGCTT
GGCCAATTGC TGGAAAGTCT GCCCGCCGAT GAAGTCACTC GCCTGACCGG GAGCGACAGT
GCCGACAAGG TCGTTCAACT GCGCGGCTTC AAACGCTATC TGGCCGGTTA CGCTCAGACG
CATGTGGGAC GCCTGCTGGA TGACGTTCAA CTGCTCGAAG GTCGCAGCGA CGACCCGCAT
GTGCAACTGA TACAGCGCGA CTTCGGCAGC TTGCCGAGCA GCGTGGCGCT CGAACTTATC
GGCATGGCCA GCGATGCAGA CAAAGCGCGA ATGACCACGG AAAAACGCAT TCCTCTGGCG
CTGGCCGAGC ATGCCCGCGA GTATCAGCAG CAACTGCGGA TAAACCGCGC CACCGAAGGC
TTCTATCGGG CGGTAACCGA CAATCTGGAC ACGCAGGCTG CGGCGCTGGG CATGCTGCAG
TACCTGCCAG GCTGGCGGGG TGAGGTTTCG ATCGATCTGT TGAAGGACTC GCTGGAGGGC
GACGAAATCG CCAGTCTCGA CAGCGATCAG GCCTCAATGC ATCGGCTGCT GGTCAGCACC
GAAGCGGGGA TCCAGTGTTT CGAACCGTCA GGTGAGCCGC TCGGCGAGGT CGATCAGCAG
TTTTTCAGGG CGTTGTTGCA GGCGCTTCCC GAACAGGTAC GGCTCGACAT TCAGTTACCA
GCTGGCGCGG ATGAGCCGCA ACTGCGCAGT CTGTTGCGCA ATACGGCGGT TCAGCGACGT
GAGCGGATGG CTGCCGTTCT GCAATTGCAG CCGATCAAGC CGGGTATCAA ATGGCCGCAA
CGCCTGCCCC ATGGCCGCAT TGGCTATCCC TTGAGTGGAC GGTTGCGCGG CTTGTTTCGT
CGCCTGGGTA TTGGCGCGTC CAGCCACTCG CCGGAGCTTG CCGTGAAAAG TTTATACCCG
GACTTTTCCG ATGCTCAGGT GGCGAGCTTC CTTGACGAGT TGCGCGCCGA ACACACCGGG
TCGGCCAGGC AACTGCCCCG GTTCGTCAAG CGAAGGCTGC GCGGTCTTGC TGATGAATTA
CGCACCCTGC AAAACACTCT GGATGCCTGG ATAGCGCAAG CGACGTCCTC GTTGCAGCGC
AGGTCAAGGG AGGTCGCGGC GAGGCGCCTT CATGGCTGCT GGAGAAGACT CAGCGTTCAC
AGCATCAGTC TTCAGGGGGA GTTTTTAGGC TACACGCTTG ATCTGGATAA CCTGCGAGTA
GAGCAAATAC CGGATATAAC CGCCAGCTTT GGCCATGTGG CTGAGTTGAA AGCGCGGAAC
ATGCAGCTTA CCCCTGCACA TGTCGATGCA TTGCTGAACA ACTTCCCTAA CCTGCGGTCG
TTGGGCCTGG GCTTCAATGA ACTGCAATCC CTGCCAGAGT CGATAGGAAG AATGACACTG
CTTACAGAGC TGTCGCTCAA CCATAACCCC TTGAACTGGA CAGCCGCCTG CAACGCCATT
TTGCTGAATC TGCGCCGACT GGAGGTTCTT GATCTCAACT ATTGTTCGCT TGGATCGCAG
GCGCGTCTCA CAGCGCTCAA CTCGTTACGT ATGCTGTTTT TGCGTTCTAC AGGCATTGAA
ACGTTGCCAG TGTGGAATTG GCGCAGGTCT GACTTGATTC GTCTGGATGT GCGCGATAAT
CGCATCTCGG AAATATCGAT CGAGGAGCTT GATAATATCG AGCGCTCGCT CAGTTCCACC
CGCCTTCACC TGCATTTGAG TGGCAACCCG TTGACTCCGC CAACGCTGGC TAGCATCAGA
CTGTTTCTCG AGGGCAGGAC GCGGCCGCGG CTGGGTGTCA GCCAGAACCG TTCTCCACTT
GAAGCCGGAC CTGGCAGTGC CGCCTGGCTT GCAGGGCTGA GCAGTGAGCA GGCGGCTGTG
CGTACCAGGC TTTGGCAGGA TCTGCGAGCC TGCGCTGGTT CTACGGACTT TTTTCAGATG
CTGGGCGACC TGACGTACTC GGCTGATTTT TCAAGTCACC ATGAAGCACT GGCCGCAAGA
GTCTGGGCAA TGATAGACGC GGCCTCGGCA AGTACAGAGT TGCGTCTCCA GTTATTCGAT
ATTGCCGCCC ACCCTCAGAC CTGTGGCGAT GGACTTGCAT TGATCTTTGG CGACATGGAA
GTACGCGTGC GGGTGTTCTC GATCATGTCG TCCACGCCAC ACGCCGCGCA GCCACTGGAG
TTGTTCAAGA TGAGCCGGAG CCTGGACCGT CTGGATCAGG TGGAAAAAAT TGCACTGCGC
GAGATTGCTC TTCGCCAGCA GCACGGCTAC AGGGTAGATG AGGCTGAAGT ACGCCTGGCC
TACCGTATCG GCCTGCAAGC TCGGCTTGAG CTGCCCGGTC AGCCCCAAAC CATGCTGTTC
AGCAATATCG CGAAGGTGAC CGACGCTGAT TTGCAGGATG CGCACAGCGA AATAATCACG
CGTGAAAGTA CGCGGGCATT TTTCGAGTCG CTGGTCGCCA GGGAATTCTG GATGAGTTAT
CTGGAAACTC GTTACGCCTC TGATTTCGAA CGGGTAAAGA AGCCCTTCAG CGAGCGTCTG
ACCCTCCTGG ATGAGTTGCC GCCAAACCGG CAATCCGATC AACAGTACCT CGAGCAGATT
GGCTTGATCT CCAGTGAGCG TGAGCAGGCG CTCAATGATT TCGCGATCAC TCTTTCCAGG
CAGATTGCCG AGGCGGTGAA CATGACGCCT CAATAA
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| Protein sequence | MFTLRYNPFE TIESSVAHAS VTPRAQDSAP FEAEHANSEF IRLNLPDWYV GAPTVLRQTL
HASQQSARRY AQALEPVRAR LLSAQQFAAP LLSKAFVERF QLDLDVEAFQ LMTWRYDSTW
NPAPLEQTLL QAALQNFAPS NRSRFDPYSA ILRTGGLRYW LIDSAERRYK VEYRDRQAID
LEQFADFCHE LDLGRQYQTH LDSVFKPPGP AAQAVASAFM DSERAAVEVL AHIAMMKGDI
TDAAYQTLLD MVKSVDQPRW DGKGVRYCQL HMLDTYTFSG SLLQGALLIQ QDGAKPDDGP
CLVYLPAEPA HPVKQFASLR AFNAWLVTAL DSKHYRRYFS RFVSLGQAPA FFAKLDARLY
PAGDRTLDPY ADLVVQAQPF SKPPFERLYE QLLAKTYDDS KVIAVPSAQV DQQAHDALIE
SLENNGMNLL NVAGFFVPVL GEIMSVVALY QLASEAFVAY EDWKHDEVED AMQHVYDIGE
NVAQMLVAGG VVAAVNGLQP SMFIESLVQR RVDGAVRLGK PSIDAYAHTV SLPDNLSSNA
LGLYEHDGKT WLPLDGKLYC VESDADGSQW RVRHPVNERS YAPRLKHNGA GAWRHEWENP
MGWDEVTAFR RLNPTCHALP EEDIHKVLHI TGANEALLRQ IHVENLRPPA LLKDAIQRVA
TERQLHVCIE ALKADDVPQV HVAHLGPWLK LLVSSPRWHE TRGLLLLDAQ GALLEAWNAG
SQMTLSSHVA GPTGHLSQVL GQLLESLPAD EVTRLTGSDS ADKVVQLRGF KRYLAGYAQT
HVGRLLDDVQ LLEGRSDDPH VQLIQRDFGS LPSSVALELI GMASDADKAR MTTEKRIPLA
LAEHAREYQQ QLRINRATEG FYRAVTDNLD TQAAALGMLQ YLPGWRGEVS IDLLKDSLEG
DEIASLDSDQ ASMHRLLVST EAGIQCFEPS GEPLGEVDQQ FFRALLQALP EQVRLDIQLP
AGADEPQLRS LLRNTAVQRR ERMAAVLQLQ PIKPGIKWPQ RLPHGRIGYP LSGRLRGLFR
RLGIGASSHS PELAVKSLYP DFSDAQVASF LDELRAEHTG SARQLPRFVK RRLRGLADEL
RTLQNTLDAW IAQATSSLQR RSREVAARRL HGCWRRLSVH SISLQGEFLG YTLDLDNLRV
EQIPDITASF GHVAELKARN MQLTPAHVDA LLNNFPNLRS LGLGFNELQS LPESIGRMTL
LTELSLNHNP LNWTAACNAI LLNLRRLEVL DLNYCSLGSQ ARLTALNSLR MLFLRSTGIE
TLPVWNWRRS DLIRLDVRDN RISEISIEEL DNIERSLSST RLHLHLSGNP LTPPTLASIR
LFLEGRTRPR LGVSQNRSPL EAGPGSAAWL AGLSSEQAAV RTRLWQDLRA CAGSTDFFQM
LGDLTYSADF SSHHEALAAR VWAMIDAASA STELRLQLFD IAAHPQTCGD GLALIFGDME
VRVRVFSIMS STPHAAQPLE LFKMSRSLDR LDQVEKIALR EIALRQQHGY RVDEAEVRLA
YRIGLQARLE LPGQPQTMLF SNIAKVTDAD LQDAHSEIIT RESTRAFFES LVAREFWMSY
LETRYASDFE RVKKPFSERL TLLDELPPNR QSDQQYLEQI GLISSEREQA LNDFAITLSR
QIAEAVNMTP Q
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